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3 genomes BUD2885 3 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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HVO_0139

Hbo1268

 - - - -

HQ3401A

Pairwise sequence scores
Consensus score743 HQ3401A HVO_0139 Hbo1268
449HQ3401A 838 234 350
442HVO_0139 234 767 304
527Hbo1268 350 304 754 

114 symbols
consensus       -----MATTRSPLAVLAALVLVAFGPLAVMWATVRGGRNLGYILGFAIYFLVAHVILPGR
#oth            1111111...1.22111211111.21.2.1.21121222.21212..2..112.12..21
HQ3401A         ::::::::::::MV::GVM:FA::L::I:L:T:TTDL:S:L:FSL::L:::::::::::W
HVO_0139        VMSDSGT:::A:VIIF:::I::V::L::::::S::::HL:PH:::::V:::AF::Y::Y:
Hbo1268         :::::::::::::::::G::::::I::V:::V::M:WD::::L:Y:::::V:I:IL::S:

consensus       VYIDARDRGSNAALAWTAIAFILPLVGAACYFVVAQ--AGHRIEAAG-------
#oth            .121.222111.212.1211.21.11.122.11122111211211211111111
HQ3401A         ::L::NG:E:D:::T::I:T::::FI:FI::Y:IG:PD:P::V:TG:TDASIKR
HVO_0139        :HK::TLK:R::TF-:AV:::L:::::::L:::::V::V::--D:TD:::::::
Hbo1268         :::H:::H::::K:::::L::FI:::::LV::L:NM:::FR:::::::::::::