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3 genomes BUD2893 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0141

- -

Hmu2432

- - -

HQ2441A

Pairwise sequence scores
Consensus score4584 rrnAC0141 Hmu2432 HQ2441A
3413rrnAC0141 4612 2942 2781
3923Hmu2432 2942 4476 3377
3756HQ2441A 2781 3377 4573

613 symbols
consensus       ---------GEDAADQRASDADPAIDYERVDVSVLVVGAGAAGARTAIELAERGVDDQLV
#oth            11111111122222222212221222..211.1..11...1....1..1..12..112..
rrnAC0141       MTPQKPSAD::Q:::G:::::G::V:::T:S:P::::::::::::V::G:::N::EP-::
Hmu2432         :::::::::--------------VPG:::::::::::::::::::::::::::::::V::
HQ2441A         :::::::::MS:TTM:SI:SS::D:E::QT:::::II:::G::::::::::QQ:::::::

consensus       LGKRDHGDAHTTWARGGINGALGTHDPEDDWTIHAADTLNEGHFINDPQKVETVTRQMPD
#oth            1...2.........1....11..11..1.1.1.......1....11..21..11121...
rrnAC0141       I:::::::::::::A::::AS::SL::::::::::::::D::::::::KA::LTAKH:::
Hmu2432         ::::S::::::::::::::::::::::D:S:A::::::::::::V:::::::::::::::
HQ2441A         ::::G::::::::::::::::::::::::::::::::::::::::C::E::::::Q::::

consensus       RLRELDDWGMDFSRTEDGEIDQRFFGAQSFRRTAFAGDHTGESMLDTLVDRAQELEIPYR
#oth            .1....1...1.1...1.211..1.........1.1..1...11.1...11..1.21..1
rrnAC0141       :I::::::::P:D:::::K:N::Y:::::::::C:V::R:::A:::::::K::S:G::::
Hmu2432         ::::::::::::::::G::::::::::::::::::::::::::::E:::::::::SV:::
HQ2441A         ::::::E:::::::::::GV:::::::::::::::::::::::L:::::S:::::::::E

consensus       ENVMITRLLSDGDQVYGAVGIDMDSGEFILFNANTVVLAAGGYAAAYNRHTSRDDENNGD
#oth            1.1...1.1....111..1.2.111...21111211......11.1.1..1...1.....
rrnAC0141       D:::::::::::::::::A:Y::E:::::::ESDHI::::::SS:L::::S:::E:::::
Hmu2432         ::::::K:::::::C:::::F:::::::V:V::G::::::::::::::::::::::::::
HQ2441A         ::T:::::I::::S:H::::::L:T:::TV:::::::::::::::::S::::::::::::

consensus       GPALAYDAGASLMDMEFVQFHPTGMAVDEDDPEWEDWSGRLVTEAVRGEGGRLYNADGER
#oth            .1...12...1.1............11.12121112.1.............1.1.21...
rrnAC0141       :::::LE::::::::::::::::::VG:RYG---:::D:::::::::::::::L::::::
Hmu2432         ::::::H:::E:V::::::::::::::::::::::P:::::::::::::::H:::T::::
HQ2441A         :A:::::::::::::::::::::::::::S:S::AE:::::::::::::::::::SE:::

consensus       FMERYSPDQMELDARDVVARAIAQEIAEGRGTENGGVHLDISHRDAEFIRERLPRMYERF
#oth            ...1...................1.11.....1.1..2..1...1221.21......1..
rrnAC0141       :::E:::::::::::::::::::::LR::::::::::Y::::::ED:Y:KS:::::::::
Hmu2432         ::::::::::::::::::::::::::::::::D::::F::L::::RT:::::::::::::
HQ2441A         :::::::::::::::::::::::K::::::::::D:::::::::::S::E:::::::Q::

consensus       ADLGVDIAEDPVEVAPTAHYGMGGVAVD-EHGETAVDGLFAIGETMAGVHGANRLGGNSL
#oth            21....2112.1.....1..1....21.1.2...2111.1.1...1..............
rrnAC0141       M::::::T:K:M::::::::S::::DI:F:S:::G:G::Y:V:::V::::::::::::::
Hmu2432         QE::::M:TE::::::::::::::::::::::::::::::::::::::::::::::::::
HQ2441A         ::::::L::::::::::S:::::::S::::Y:::DI:D::::::::::::::::::::::

consensus       AETVAIGAVAGDRIADRVTGADANGALPDAQRANIADPQFRELRELAAADGAHDVEDVFA
#oth            .....2.212.111.21.1.2121121.22212211212122.12.122..211122112
rrnAC0141       ::::::::LV::HV:TQ:::D:R::::::G:::-::ERE:QS::::E:S::DETP:QLL:
Hmu2432         :::::F:V:::E:::E::D::---:Y::E:VVSD:::::::G:AT::GR::::::T:::T
HQ2441A         :::::Y:T:T::::::::::S:::NTI:HSL:E:LIQ:HLD:::S::N:::E:::MT::E

consensus       ELQDLLWEHAGLLRTDESIRAGLDALRRVRQRAANMNV-GDATSESFEFAIDIGFMLTVA
#oth            1111.1....11..112.221.112.221122221.2.1.221.2...1.1.21.1..1.
rrnAC0141       D:G::::::::I::::::VS:::EK::NL:E:TG::H:D::R::L:::L:V:LS:S::::
Hmu2432         ::::::::::::::::T:L:::::::DE:::K::D:D:::S:::S:::::::::::::A:
HQ2441A         :I:T:M::::R:::DQS::ES:I:E:E::QSMVS::::::PVG:::::::::V:::::::

consensus       EAVLRGAAERTESRGAHYRTDATETDPDWQRNIYVEQADIGGMRTETRGVATPSDAVQAA
#oth            .11.11.22.1........1.2111111.12..11112.2.11112.12.21..1..11.
rrnAC0141       ::L:L::RK:D:::::::::::PDV::::R:::L:D:G:T:-LELT:::::E:::::SE:
Hmu2432         :::::::L:::::::::::::E::::::::C:::F:RS:V::::::::P:G:::::::::
HQ2441A         :S:::S::L::::::::::I:H:::ESS::K::::::::::::::W:ES:D:::P:::::

consensus       LDEGHELDYHQLE
#oth            1.1.1.....1..
rrnAC0141       V:V:Y:::::H::
Hmu2432         :::::::::::::
HQ2441A         :::::::::::::