3 genomes BUD2897 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3185 - - Hmu2570 - - - HQ2364A

Pairwise sequence scores
Consensus score	982	HQ2364A	rrnAC3185	Hmu2570
606	HQ2364A	1003	364	428
598	rrnAC3185	364	842	381
663	Hmu2570	428	381	945

147 symbols
consensus       -----DQALFPMEKRRLAGLIAILSFGLSSLAAVLGLGGSIAAVLIILGFFILLPLIALL
#oth            111112221222212121122111211121.2111.12.1122122...1.1.1..11..
HQ2364A         MTKSM::S:PTFS::::::::::::::::::F:::::-:T:VS:TF:::::::::::G::
rrnAC3185       :::::------------------------M::GAA:::::::P:S::::W:::A::V:::
Hmu2570         :::::MS:::::::W:F::VV:::T:::T::V::::AP::MI:A:S:::::L::::::::

consensus       GSDFPLVESSDDETAADETDAPAAED---DPVDHLRERYARGELDDAEFERRLDRLLETE
#oth            .111.11111111122.112212222111..122..1...1..1222...1..121....
HQ2364A         :A:::::::::NKSS::::TRDE---:::::LTT::Q:::N::I:E:::::::ELM::::
rrnAC3185       ::KL:MI::PE::::Q::::::N:TEPTV:::::::::::::::T:S:::::::::::::
Hmu2570         :::::::AE:::::--:TVSG::V::::::::EL::::::::::SKE:::S:::H:::::

consensus       SLSAGQEADNTDDEAD--REILLEEE-
#oth            111122222212222111..22112.1
HQ2364A         DVQQSTTNSD:::VS:QL:::KR:L::
rrnAC3185       ::::TS::E::TG:::::::VS::T::
Hmu2570         ::::::SV:PE-----::::L::D::R