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3 genomes BUD2906 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
- - -

Hbo2920

Hmu0077

- - -

HQ3060A

Pairwise sequence scores
Consensus score2980 HQ3060A Hbo2920 Hmu0077
1271HQ3060A 2996 781 762
2135Hbo2920 781 2870 1732
2214Hmu0077 762 1732 3099

426 symbols
consensus       ----------CAGTAALSGCLAS------GNRPLPEVPEGSWTQHGADAANTFASDVAAP
#oth            111111111121122221111211111112222..11.2.1.1.111..11.1.1..21.
HQ3060A         ::::::::::M::VCGV::::::::::::PD:S::TA:T:R:N:SRC::QK:A::::RV:
Hbo2920         ::::::::::-------------::::::----::::::::::::::::::::::::S::
Hmu0077         MDRRTFLTTT:::::::::::S:LPWTSG::T::::::G:::::::::::::::P:::::

consensus       SRGNLAWTSAAFTRWDPVIADGTVYTTNFAPSGDGSAIALDAQDGEERWRTTLGRDRRAG
#oth            1.1111.1121111121.1..1.1..111211211111..1..1.211.1.1.122222.
HQ3060A         E::::::DGGS-G:MLS:V::Q::::VD----::DGLT::N::T::H::Q:A::L::D::
Hbo2920         :::::V:::E:::Q:E::::::::::::::::KE:::::::::::S:Q::::::GKDSN:
Hmu0077         ::ASH::::::::::::::::::I:::::D::H::::::::::::T:::::::D:EG:H:

consensus       RA------LVDGRFIVAHDSRLVALDRQNGDIDWERSLAGLEPS----IAELLAADRRIG
#oth            1211111111111121.1112.1111212.122.11112.112.11112111112.122.
HQ3060A         EPVGVSGGVI:KQLLI:TPGQ:RSFNTSD::KQ::QG:R:RAS::::::STTVLP::Q::
Hbo2920         :V::::::::G:::::::::::::::P:::::V:Q:::::::::GLGSS:::::::E:S:
Hmu0077         ::::::::::::::V:::::G:::::::G:GV:::::VE:::T:::::F:::::V::ST:

consensus       TVDVPYADG--LKAFQAEDGQRRWRAGELRGQRRTPAIADGTVYAIGRVD-GAASLAALA
#oth            1121112111111.12111.111.222112112211.12111..22.2111.222.21.1
HQ3060A         L::FTHRQKYYII:VTT:S:EIK::DSA::IGG:GL:VFNDH::VT:TSQT:EEV:RC:E
Hbo2920         ::I:::S:::::::::::::::::ET::IT::LN::::Y:::::T:::::::VD::V:::
Hmu0077         :IV::::::::::::G:T::::::K:P::P:::V:::::::::::V:S::::::T:::::

consensus       LDDGEIRWTRALADRSR-SAPVATDRGVLVVDGATLVVHDRETGDRRAE-HELDHDELGR
#oth            111.221.1221212121121.2112...11112111.1..11.11.2112112212212
HQ3060A         V:T::LI:QQGI::TD:Y:TH:CATS:::IGE::DIT:Y::GD:TQ::S:V::P:---::
Hbo2920         ::::T::::T::E:P:D:GD:::::Q:::::::N:::::::::::::S::I::VS::::S
Hmu0077         :A::SV::::S:DG::P:::::V:::::::::DR:::::::::::::G:R:SF:Y:GTTF

consensus       DATIAADGGTAFVAA-ERGLAAVDIADGTTQWQYDRDAHRDFAAGC-AVGRETVVAIADR
#oth            2211.2.11....22112..2..1121.111.211222222222.212..2.1.112212
HQ3060A         VRS::V:D:::::L:::S:::::SVP::SR::SLS::PT:H:VR:PP:::::S:::----
Hbo2920         LT::::::::::::TY::::F::::ET::::::::DS::D:S:F:V:C::I:::IS:V:K
Hmu0077         :::V:T::T::::TS:DD::T:::::::::R:E::EWV---YT::::S::T:::::M:::

consensus       PEFMDSLGCRTVTAFDRETGAARWNYALDDDHAGTI--RPILADGAVFFATDSIDALAAL
#oth            1122212222111..1.11.22..2.211121221.112.1.......11.2.2221111
HQ3060A         :V::E::::PA:V::E:ID::R::H:T:G::FC:::WSQ:V:::::::VD:-:LHNV:::
Hbo2920         ::SVS:TYGK::::::::::DV:::::::GY::L::::::::::::::::::::G:::V:
Hmu0077         G:YT:----::I::::::::E:::D:VM::F:TPS:::P::::::::::::S:S:G:V:I

consensus       GDVPA-
#oth            ..1121
HQ3060A         ::IS-:
Hbo2920         :::::E
Hmu0077         ::::E: