Home |  Text search
3 genomes BUD2914 4 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

pNG6010

 - - -

Hut2219

Hut2430

 - -

HQ3603A

Pairwise sequence scores
Consensus score1728 Hut2430 Hut2219 pNG6010 HQ3603A
1002Hut2430 1715 866 867 552
1369Hut2219 866 1725 1271 791
1571pNG6010 867 1271 1730 1012
989HQ3603A 552 791 1012 1145 

234 symbols
consensus       MSFNNRSDALIELLEDLQQSDHDYVLVGGYAVSAFNARFSTDLDIVVAPDSKADFVEFLE
#oth            ..222..1..111.11.1121231.........2.11.......1.211.22111.2...
Hut2430         ::QEE::E::::V:::::E::I:F:::::::::Q:ET:::::::L:I:::EYD:V:A:::
Hut2219         ::LGD:::::VS::A:::E::LS::::::::::V::::::::::::AP::AVDE::::::
pNG6010         :::::::::::::::E:T:EG:E:::::::::::::::::::::::::::::::::::::
HQ3603A         :::::::::::::::E:T:Q::K:::::::::::::::::::::::::L:::::::G:::

consensus       QRGFERTDS---HAKEWIYDTEVIEFEKRLTPQQPIGFDLLVNGLGCRQTEAQWSFDYLY
#oth            221..3111111121211..1.1211.1112121.1.1.1..........1.1..12..2
Hut2430         AHH:::Q:ALEVPPE:T:::R:IEL::RSEDLVH:V:V:V::::::::::D:E::LA::R
Hut2219         E::::Q:::::::S:H:::::::R::::::A:R:::::::::::::::::::::::E::S
pNG6010         :::::K:::::::::::F:::::::Y::::::::::::::::::::::::::::::::::
HQ3603A         :Q:::E:N:::::::K:F:::::::Y::::::::::::::::::::::::::::::::::

consensus       DHSHQREISGGTVTTTARVIDGAVLVAAKLHSGRETDLRDVLAVAEEIDLDAVTPHLHRG
#oth            2..12111...121.1.112..321.1211112121112111122212212212212211
Hut2430         :::TE:A::::SKS::::TA::EI::::::::A:P:::A::::AVP:::::I:ET:I:::
Hut2219         E:::R:::::::M::S:N:V::T::::T:::::::::::::::::::VR:E:::::::::
pNG6010         :::::Q:V:::::::::::::::::::::::::::::::::::::::::::::::::R::
HQ3603A         G::::Q:V::::::::::::::VDR:V---------------------------------

consensus       DDDALREQLERGREFIASDGLRHGYRSDFGASAASEDTVTALREYLEEQIN-L-
#oth            1331232111213.22222213122212..312313322221312133113212
Hut2430         :PG::QA:::DA:::::EG::D:RFK:L::Q::::S:DID::L:F::G::S:-:
Hut2219         :EQ:RK::::::K:VL::::::::::::::E:SI:TG:::S:::::T:::ER:G
pNG6010         ::::::::::::L:I:E::E:K:::::::::::V::E:::::Q:::SV:::H:S
HQ3603A         -----------:T::-------------::---------------------:-: