3 genomes BUD2916 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0058 - - - Hut2384 - - HQ3637A

Pairwise sequence scores
Consensus score	792	Hut2384	rrnB0058	HQ3637A
583	Hut2384	807	485	241
677	rrnB0058	485	907	365
370	HQ3637A	241	365	480

122 symbols
consensus       MARITASYPDDLDDLIEGAVEAGVFGGKSDALREFVREYFEDHENERIAAAVALYERERI
#oth            .2.1.211....12.1..1.1....11....1.111.....1.1...1...111111222
Hut2384         :S:T::TI::::T::M::::D::::EN::::I:HVL:::::E:P:::V:::I:::::GDV
rrnB0058        :::::G:::::::L::::::::::::::::::::::::::::::::::::::::::::::
HQ3637A         :P:::V:::::::F::::V:::::::::::::::::::::::::::::::::T-------

consensus       TLGDAARLAACNRRTMRDRLREEGVELRLGLEDEADAADEIEAARNLE------------
#oth            11121111122212111.21.121111111221221122121211211111111111111
Hut2384         :::T:::::D:::FE:::::::::::::::P::M:::R::::T:::::::::::::::::
rrnB0058        ::::::::::VD:W::::I:::H::::::::V::D:::Y:V::::E::FDDEDSSDEEPR
HQ3637A         -----------PP::RT:LT:---------------------------::::::::::::

consensus       --
#oth            11
Hut2384         ::
rrnB0058        AK
HQ3637A         ::