3 genomes BUD2917 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0424 - - - Hut1227 - - HQ2688A

Pairwise sequence scores
Consensus score	2483	HQ2688A	rrnAC0424	Hut1227
1941	HQ2688A	2574	1618	1674
2037	rrnAC0424	1618	2438	1793
2072	Hut1227	1674	1793	2487

332 symbols
consensus       --------MVLVVLGIDALDPDLVDPDNHPNLTLNAHRAIDTINSVAGEPSTHELWPTII
#oth            11111111.11111.......1.1..12.1..1122122.1..2.11.............
HQ2688A         MMTYPPRD:TITI::::::::::I:::T:E::SM:::HP::::V::::::::::::::::
rrnAC0424       :::::::::::::::::::::E::::A:::::::DTYQS:E:::::E:::::::::::::
Hut1227         :::::::::::::V:::::::::::::M::::::TS:::::::D:H::::::::::::::

consensus       TGLAPSEHGLKLDDGVAWENPILRIGSAAADYLLPDAIQTRIGAWLLTNTGEDAFREPAT
#oth            ...2.1....1.1...1.1..21.2..22.211..121.11......1..11....211.
HQ2688A         :::T::::::::::::T:G:::F::::NI::::::QK::S::::::::::S::::::Q::
rrnAC0424       :::::K::::::E::::::::L::Y:::::S:::::G:::S::::::N::::::::V:S:
Hut1227         :::P::::::E::::::::::F::L::DL:EFV::::L:::::::::::::A::::T:::

consensus       YYEDNGISTVFDGREAAAIGIPNYVVDPDAEDREHALRRSLGDLFERDGDAQGGHTSSDP
#oth            ..222111.1....1.22........1.12.....1....1.......22.2...1.1..
HQ2688A         ::IE::L::I::::::E:::::::::N::D::::::::::M:::::::S::K:::::A::
rrnAC0424       :::KE::::::::::::T::::::::::EN:::::S:::::::::::::S::::::::::
Hut1227         ::G:KS:E::::::D:KP::::::::::::::::::::::::::::::PE:T:::R::::

consensus       AEFYEQCMEMAMVRIARARRALRGRREELIFAYTSGLDLIGHVTYDNPDLQMDAYAEIDN
#oth            21.....1..2.1....1.....12121.1.1...1......11..211..11..2.2.2
HQ2688A         I:::::::::G::::::T:::::S:NY::::G:::A::::::IS:::::::H:::N:M::
rrnAC0424       :A:::::L::S:::::::::::::G::S::::::::::::::::::Q:N:::Q::S:L:D
Hut1227         H:::::::::::I:::::::::::D:H::V::::::::::::::::LH:::::::::::E

consensus       FVGELANDLREDDELLLVSDHGLQDGVHTDEAMVAGTNCTLVDNIDSVLDVRAAIEAELR
#oth            ....122..211.1..........1.1..2..1..1.2211112....1...1.1.11.1
HQ2688A         :::::IG::YPE:D::::::::::::L:::::V::S:D:::I::::::T:::::V:DA:D
rrnAC0424       ::::V:S:::::::::::::::::N::::H:::::::SPR::EG::::::::G:::::::
Hut1227         :::::R:::G:::::::::::::::::::S::::::::E:M::S::::::::::::::::

consensus       RRDHSGPDRDALRRPNNGGDAVTEQLEDLGYM
#oth            22..1212222.2222211.2.12.......1
HQ2688A         QN::APTG:ER:VQ::::::S:RK::::::::
rrnAC0424       H::::::SS:S:--SIK:N:T::S::::::::
Hut1227         :T:::-::EQ::::TQGD:::::::::::::I