3 genomes BUD2931 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0738 - - - - hla2486 - HQ2372A

Pairwise sequence scores
Consensus score	1261	rrnAC0738	HQ2372A	hla2486
845	rrnAC0738	1248	525	585
750	HQ2372A	525	1272	602
918	hla2486	585	602	1257

172 symbols
consensus       MYEDILYPTDGSDGAAAAAAHARNLAENHDATVHVLCVVDTRHVGIGMIAAGLDDATAGM
#oth            ..22..1.....2112..22.2121.221...1.11211.121111..2212222212..
rrnAC0738       :::H::F:::::::::::L::::::::T::::L:IMT:L::SSPH:::TS::PEG::T::
HQ2372A         ::SQ::::::::EN:E::FD:LESI:L:::::::::FI::PG:::S::::ELSP:NIS::
hla2486         ::T:::::::::T:SN:::E:V:L::SMF:::::::::::::::::::SG:F::EG::::

consensus       IGESATDKEGGMVGERDNAEERRASLRERGEAVVDAAADALGDVDTRTAVQAG-NPHRAI
#oth            2111212212.11.12222112221.2.21121.22111221212.2.1122.121122.
rrnAC0738       :A:EHDES:P:::::DH:I:---S::Q::SQ:I:E::::EVDT:::V::IER::P:::::
HQ2372A         T:::S:G:QS::R:SPEIP::T:R::F:Y::T:::DV::D::E:G:::E::V:ADVYQK:
hla2486         S:-::::T:::T:::::D:D::Q:E:::H::S::KE:SA:F::IE:T:::M::::::TS:

consensus       LDYADDHAIDLIVMGTHGRTGVDRYLLGSVAEKVVRLSDAPVLTARASDDD-
#oth            .1...112....1......1.111......1...1.2..1..1.2.212221
rrnAC0738       :::::EN::::::::::::::IE:::::::::::::T::V::::::F:::ES
HQ2372A         :::::::H::::T::::::R:::H::::::::::::::::::::I:H:E--:
hla2486         :E:::::D::::::::::::::::::::::T:::I:M:::::M:V::GVE::