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3 genomes BUD2935 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnB0176

- - - -

hla2121

-

HQ2712A

Pairwise sequence scores
Consensus score1675 hla2121 HQ2712A rrnB0176
693hla2121 1678 221 252
979HQ2712A 221 2233 493
900rrnB0176 252 493 1608

313 symbols
consensus       -----------MNLSLNRDDRERILARAAGAFAAIL-----VFTDRSIRSAAIVLVLAAG
#oth            111111111111211222111222221221212.21111111112222212121111221
hla2121         ::::::::::::VS::G:TA::QLT::DVLSLI:F::::::ALVYGVTKDVET:::I:F:
HQ2712A         MRFLHSSSLVSPM:EM:G:::VHV:L:-T:::::::TTGIW::::::LI::::PF::---
rrnB0176        :::::::::::::::VQ-::TL::FVG:::V:T:LV::::::::ENT:::L:P::I:S::

consensus       IAAWRVIDILRETYDIDSGMNGIAIGAFLTAASGAWL------TLGANRP-WIPAIAALC
#oth            222221222121112221122.222.2111111121.11111112122211.21222212
hla2121         F:FVEATS:::::PTV::RWV:VGL:::I:V::L:::GWELTA:T:TGG:V:F::LT::I
HQ2712A         :VV::::ET:LDP:::P::TD:::::L::::I::S::::::::IV:::::::L:V::VV:
rrnB0176        ML:YS:V:---:::GLSN::::LVY:IG:V::-:VF:::::::::NYT-T:::RGVVT:V

consensus       GLWFLADGAATIRDGPSAREPHDMLANPES--EAMLRMQQANHVHRELRE--QPQTPAEL
#oth            .2..22.1221211121222112222221111.11111122221212.11112.2.11.1
hla2121         :V:::F:AR:DFA:ST:SD::D::S:S---:::V::V:NH:HL:VE::KQ::G:K:VT::
HQ2712A         :M::T:::YK:Y::::PGHST:SY:E:T::GI::IQ:V::VG:IM:S:::::H::::::V
rrnB0176        ::::VL:::T:::Y:-:::T::EFVSG::::::::::::IL:T:::T:::SN::H:::::

consensus       AAACNLTESRAREALEFLTDRDMVEQVEEDKKDSIHR-----------------------
#oth            .221211.112121.121121111221122221222211111111111111111111111
hla2121         :D::::::::I::V:D:G::DG:IYP:DT:TS:TTK::::::::::::::::::::::::
HQ2712A         ::DVGIS:KE:AL:::S::E::::::::HG::::::SEIGRDDELNGRMSASTVAPTETK
rrnB0176        :EV:D:::::V:S:::Y:EQ::Q:TKT::E-------:::::::::::::::::::::::

consensus       -------------------------------------YRADDQNFGGLARVRRNGAWIPR
#oth            1111111111111111111111111111111111111.1122222111221222221111
hla2121         ::::::::::::::::::::::::::::::::::::::AL:ESKV::::F::S::KR:L:
HQ2712A         THVDTSGSVDANVNKTPSHEVKTQQSEANESQNQQIL:::S:GS:S:RN:IMQGLQ:::K
rrnB0176        ::::::::::::::::::::::::::::::::::::::::VP::W:R:TP:V:FV::L::

consensus       RLARPF-----NR
#oth            .12...111112.
hla2121         :::::::::::Q:
HQ2712A         ::F::::::::-:
rrnB0176        :IL:::FQVSN::