3 genomes BUD2941 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - HVO_2263 - - - hla1619 - HQ3596A

Pairwise sequence scores
Consensus score	3445	HQ3596A	HVO_2263	hla1619
2044	HQ3596A	3655	594	594
1648	HVO_2263	594	6120	573
1229	hla1619	594	573	2186

846 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
HQ3596A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_2263        MTSEYYFQYWETVSSQRTKEYDELKDGEALGGKRPMIQNDRFEMLKRLCDEAGIDDWVGE
hla1619         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
HQ3596A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_2263        IDHTATYQSNKQKIMNRYGLSGFEVDQEQKLKKLEAEAEDREAEAPEDAPTSFEEQMRQQ
hla1619         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -------------------------------------MGRQANRDQAAALAQASLSAVR-
#oth            111111111111111111111111111111111111121122222222222222122121
HQ3596A         ::::::::::::::::::::::::::::::::::::::::G::::G::E:V::T:T::E:
HVO_2263        SGGTKQPADTIEVESIDGGSEQPAKNKQQNTQSNKSPS:::SQKS:IS:S:SL:::Q::N
hla1619         :::::::::::::::::::::::::::::::::::::----------------------:

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
HQ3596A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_2263        KCLKTIEEAYAETQPALIDALPGTGKSYAAVEAASTTETPITILTSRGREERYAEIESWC
hla1619         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -----------GADDDCRELA---------------------------------------
#oth            111111111112222212221111111111111111111111111111111111111111
HQ3596A         ::::::::::::GE:G::::::::::::::::::::::::::::::::::::::::::::
HVO_2263        QTHGLSSKVLPS::K::PTF:GKHGSQLKTRFKKYRDLGVTVSDLHAHWSPPCQNESRCP
hla1619         :::::::::::----------:::::::::::::::::::::::::::::::::::::::

consensus       ---------------------------------------------------------IQA
#oth            111111111111111111111111111111111111111111111111111111111222
HQ3596A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::H:
HVO_2263        YQSAWDFQPEDYDVIMGYYTQAYVDKVTENRVVVIDEIPSDAFLTQFEDPQTPITNFL:Q
hla1619         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::---

consensus       RNGIAHPNAHLLIANKDADDDAAAELTFDARGADIDGDN---------------------
#oth            2212221222212222222222222222222.2.12222111111111111111111111
HQ3596A         :D:Y:::K:Y::LYGTI::::::T:::T::F:F:L:S:::::::::::::::::::::::
HVO_2263        T:::PF::Y:S::::::SQKEET:LKW:EN::I::G:SKQILDANTSDYHIHAPLLVLGI
hla1619         ------------------------------M::::----:::::::::::::::::::::

consensus       ------GNNWKRARLGRNAVLA-DRNGNGALIHEPPELT----NANNVIALDATDRERLW
#oth            111111121222221122212211212222222211221111122221121121222212
HQ3596A         :::::::T:V:QV::::::::V::::HH:::::::::F:ARNGQR:S::G:::::::H::
HVO_2263        LISEPL::::S::S::GGQ:F:H:Q:::KMSVLT::T::::::::K::::::G:PTL::Y
hla1619         ::::::----------------:----------------::::-----------------

consensus       DLAINQNFERRDLLDDPR-RREYLQDTLNLNIVQTT-DNIRAYQGG-EGVNFDRDIALVR
#oth            21222222.12211211211211112111.22...1122222.21112111212.11111
HQ3596A         E:::G::V::::IHET::A:::F::Q::::QV:::::PHTKT:E:SKK:R:::G::::::
HVO_2263        ::MF:VG::QKQ::S::E::E::I:::Q::K::::ELKY::P:TS::SS::V:::E::L:
hla1619         --------::IP::::DQ:KQL::ESV:G::L:::::::WN:::::::::SPTV::PV:E

consensus       AVAEVEG------------RNPGVITSKKALRQIEAHNINDDIPAIDNYGNLRGSNALGE
#oth            211112111111111111122.1...1112122212221222222222..112.1.2112
HQ3596A         ::::EY:AGRLRQDTLTSTSK:::::T:VVQQE::D-E:E:::S:::H:::VT::::M::
HVO_2263        E:IA:HS::::::::::::DD:S::::C::::KLK:T::-PIS:NSTY::::::::E:AK
hla1619         KI:::::::::::::::::::::::::::G:N:Y:N:GL:SLVTQTE:::G:K:I:T::T

consensus       LRVGVILGNPHFGDDFIEKWAALAGEQVSRTE--RGEALDYG-PFGNAALQHMRQNQVLQ
#oth            221..11.21.2..221.1.2..112211112112.2121..111.122121111121..
HQ3596A         :NL::VV:CQ::::YTV::::::::::::::G::::::::::C:T:::Y:K::::D:T::
HVO_2263        KD::::::S::Y::E:::R:S::F:FEA:G:K::T:T:KS:::A::DEL:::::E:E:::
hla1619         T::::::::::P:::V::::G:::NIS:E:Q:GTE:KNT::::::::R:MEAEI::K:::

consensus       AVLRFGRDEE----GATVYVHTAALPEWLPAEGAGAVVRARIEHE---REVIRTARNFRD
#oth            .12..111111111..1.111.1.111111222221111222222111211121221121
HQ3596A         ::::::C:::::::::I:FA:::::H:D::VV:D::::::FS:ST:::Q::A:::QQ:::
HVO_2263        ::F::A::GS::::::::::N:::I:P:::R:I:LG:S:T:TST::::::I:DVLS:KGK
hla1619         :AM::::T::HGEK::::::::S:::::VE:KKRF:T:DSW:T:KNGMKQ::E:I:::D:

consensus       ---QEAKVGDIADCVDCSRNTVRRHLATLAEQGYLDRRDAGRGGANQFHNDRLENANKYG
#oth            11121221222122.1212111.21.21.212.1122122.212122212221221211.
HQ3596A         :::::FT:S:LV:T:::::R::::V::E:S:M:::E:H:P:D:L::EY:TI---DEPGS:
HVO_2263        :::--:SGTE::TK::KHP::::S::R::QKE:IV--:KT:KNKGT:W:D:G:S::::::
hla1619         WKAL:W:::KV:E::TI:K:ST:K::K:::::::::K:T::::::FH:S:V:::E:Q:::

consensus       AVELAEIDNLGTQIRERDHGDQDELEDELDMHLRDPGIDDADRDRHGGDTAMLDARD---
#oth            2.1122122222222222222222122222222222222222122222222222222111
HQ3596A         D:::PT::T::::T::N::PG::S::QYYTWFV:::SPQ:E::SQ::VG::T:P:P:EVT
HVO_2263        ::D:NS:T:KTYK:PI:EI::KI::K:::::::EQY:::Q:E:::LI::VW:T:H:T:::
hla1619         H::F::---------------------------------------------------:::

consensus       ------
#oth            111111
HQ3596A         AGPPPG
HVO_2263        ::::::
hla1619         ::::::