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3 genomes BUD2976 4 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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hla0509

NP0788A

HQ1109A

HQ2748A

Pairwise sequence scores
Consensus score422 NP0788A hla0509 HQ1109A HQ2748A
351NP0788A 420 316 310 284
361hla0509 316 440 335 292
372HQ1109A 310 335 427 291
319HQ2748A 284 292 291 413 

55 symbols
consensus       ---MPECQNCGSFVTADYVRVFAPNELDRPRVCPQCEDKIRDGADVREARATRRS
#oth            111..2.1...1..122.1...1.111221....2.1.21.1.11.....11.32
NP0788A         :::::::::::A::::A:A:::T::GVEN::::::::::::::S::::::S:::T
hla0509         VTS::T:::::::::T::::::T:::V:::::::A:::LV:::::::::::::SN
HQ1109A         :::::H:E::::::::E:::::::E:::::::::N:D::V:::::::::::::H:
HQ2748A         ::::::::::::::SR::::::::EG:NHA::::::::I::E::E::::::K:V: