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[L] (-) COG3039 Transposase and inactivated derivatives, IS5 family
2 genomes BUD3002 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0035

rrnAC1580

- - - - - - -

Pairwise sequence scores
Consensus score2102 VNG0035 rrnAC1580
2082VNG0035 2105 1031
1051rrnAC1580 1031 1071

270 symbols
consensus       MASLRRLAWMCRNLAKQHVDDPDVPAAPSGAGGYAEWVQIALILYRVELEKSLRESEDYL
#oth            111111111111111111111111111111111111111111111111111111111111
VNG0035         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1580       ------------------------------------------------------------

consensus       NEMPGVLAVFGLDEAPHYSSFCRWENEYRMRELRRLLRASAEQAGWSGEAAIDASGFQRD
#oth            11111111111111111111111111111.........1.....................
VNG0035         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1580       -----------------------------:::::::::R:::::::::::::::::::::

consensus       QTSYHYRDRANYSFQSMKTTILIDVNSLAIKDVHFTTQKAWDGHIGMQVFRRNAEDLRVL
#oth            ..............1...................1.........................
VNG0035         ::::::::::::::::::::::::::::::::::Y:::::::::::::::::::::::::
rrnAC1580       ::::::::::::::H:::::::::::::::::::::::::::::::::::::::::::::

consensus       SADANYSWSDLREECRSNSTRPLIKHREQTPLQKAHNARMNEDYNQRWMSETGFSQLKED
#oth            .................1..................1..........1111111111111
VNG0035         :::::::::::::::::E::::::::::::::::::H:::::::::::::::::::::::
rrnAC1580       :::::::::::::::::::::::::::::::::::::::::::::::-------------

consensus       DGEKLRSGAGRPVPELTRKCIIHNLTQAAS
#oth            111111111111111111111111111111
VNG0035         ::::::::::::::::::::::::::::::
rrnAC1580       ------------------------------