Home |  Text search
[M] (-) COG1361 S-layer domain
2 genomes BUD3031 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi

VNG0001

 -

HVO_2082

 - - - - - -

Pairwise sequence scores
Consensus score3004 VNG0001 HVO_2082
2104VNG0001 2913 888
1788HVO_2082 888 2784 

408 symbols
consensus       MTRRSRVGAALAAIVAALAALSAAAPAAGAQSAGSGAVQITINDTDVEPANPTTGEQVLI
#oth            111111111111.1.1111111.11.111...11111111111111.1.11.11.11.11
VNG0001         :::::::::G:::::L::::V:::::I:::::::::::SV::G:V::S:::::::T::::
HVO_2082        --------V:TV:L::VTSV:V:SL::VS:::G-----::VV:S:T:::RE:YV::L:TV

consensus       RASINNFESASGGARLNEVTLRSGDGILAEADNLGRLGAGDSIDVPLSSTFTEAGDHQLK
#oth            11111.11.1..1.111.....1.1.11.1111..1..1.1.11....1...11.11..1
VNG0001         TP::::SG::::S::V::::::-:::L::TE:S::::::::::E:::::::::P:::::S
HVO_2082        ::TVS::::S::::D:K:::::::G::V:::S:::T::P:G:V:::::T:::S::EK:::

consensus       VHVRGRNENGNVINVQRPVIVTVDDRDSRAGLSAREQANNGSTDINAEITNYGNINIKNG
#oth            ...1.1111.1.11.111.1...11.1111.1.1111111111111111.1..1111111
VNG0001         :::::L:PD:S:FY:::S:Y::::::T:DV:V:::TT:T::::::Q:T::Q::T:P::S:
HVO_2082        :::S::H::::::::EY::::::EE::V:::::VG::T:D---TV:V:L:::::T:LS:V

consensus       EIQASSNGRQIARAPTANLDEDANANVTFDGADIPDRELLIRAEYTLDDEHFTHTLNEEI
#oth            .111111.11111111..11111111.1..1.111111111111..1.1.11.1.11111
VNG0001         :L:VV:D::IVE:::V::VS:SDS::::::::S::SG::V::G::::::::S:::T:TTL
HVO_2082        ::T::V::S:::QRY:::::P:::RS:V::T::MS::VV:FT:T::V:G:T::T::S:::

consensus       EDDPQRPADIALTGIEASQRAGSYTIQGDAANLGNADAASVRLNAKETANVGDGLSANGG
#oth            11111111111..11.11111111..1.....1.11..1..111111111.11.1.11..
VNG0001         TYQ:::S::V::::V:::GGGTT:::S:::::::S:::::::V::-----::::::::::
HVO_2082        :::SV-:GE:R::S::TT:::::V::::::::V::T::S::L:TV::::::TH:-:PS::

consensus       YFVGRIEASEFATFDMTAQADGAPDEIPIEVNYIADGDRYSDTQEVDLDGAGAAPATSPE
#oth            ....11.1.......1.1111111111..1.1.11..1.111111.11111111111111
VNG0001         ::::K::T:::::::::V:::S:V:::::T:::S:::Q::::VVT::VS::SSGS:::::
HVO_2082        :::::V:::::::::V::ELS:E:TTV::::S::V::::VTT::::P::SG::::V----

consensus       RAAGQQQERAPGPNNGASGGGQLPLFKIGGALAVIAIGGVGIRRWRNH
#oth            1.1.1.1111.111111...11...11...111.11111.111...11
VNG0001         ::P::::K:::S:S:::::::-:::::::::V:::::VV:VV:::::P
HVO_2082        -:::S:S:QG::S:ESQ:::S::::PV:::V:V:VVL:::::Y:::Q: