2 genomes BUD3042 5 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2142 rrnB0023 rrnB0120 rrnB0138 HVO_2136 - - - - - -

Pairwise sequence scores
Consensus score	731	HVO_2136	rrnB0120	rrnB0138	rrnB0023	rrnAC2142
431	HVO_2136	732	321	329	246	317
576	rrnB0120	321	715	639	177	231
589	rrnB0138	329	639	706	182	247
284	rrnB0023	246	177	182	743	307
359	rrnAC2142	317	231	247	307	724

100 symbols
consensus       MPSIIDETVFGEPSGRRLAVVQLCGALLFAGQQVYYAITEGATPAYWGLFLSAGTALSGI
#oth            .112111.1.2..2123211121311.212122332222211332313.3122.11.1.2
HVO_2136        ::::V:::L:S::T:GLFP::::S:::V:S:LYWQ::VV:QSLSGN:P::MI:::::::L
rrnB0120        ::P:::::::::::-:G::::Y::::::L:::::::V:V:::::F:A:::::T:M:::::
rrnB0138        ::::::::::::::-::::::Y::::::L::::G::V:I:::::F:A::L::::M:::::
rrnB0023        :VPYVS::L:N::Q::P::L::FGVS:T:LCMFACT:S:G::GD:R:I:V:VV::::::T
rrnAC2142       :::S:SN:::S::::P:I:LIHFA:S:V:::LY:SAWS:D:SAA:T:L:AMVV::G:A::

consensus       AESLPKPRRRAAGVLRVTAILVLVCLLVALFVTPDLL-GN
#oth            ..1..23..11..1..33.211132211221231311123
HVO_2136        :::::ED::::::G:::V:V:::T:::AL::LA:E::::M
rrnB0120        :::::N:::::::::::::LV:::SM::I:::::::::I:
rrnB0138        ::::::::::::::::L::LV:::S:::I:::::::::T:
rrnB0023        ::::::N::Q::::::FA:::AFGI:VA:P:IGFRFII:G
rrnAC2142       ::A:::H::QL:::::SI::::FF:IV::AL:V:GF:::I