2 genomes BUD3045 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG5009 rrnAC1574 HVO_A0099 HVO_A0404 - - - - - -

Pairwise sequence scores
Consensus score	1257	pNG5009	HVO_A0099	HVO_A0404	rrnAC1574
1148	pNG5009	1273	1142	1140	384
1251	HVO_A0099	1142	1257	1251	374
1245	HVO_A0404	1140	1251	1257	371
380	rrnAC1574	384	374	371	1624

207 symbols
consensus       ---------------------MDATVVCIDQTKKSVQVEPRAAWFPRGTRPSVELSGQRD
#oth            111111111111111111111111...11..11.1.1111.1111.1.11.11111112.
pNG5009         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::L:
HVO_A0099       :::::::::::::::::::::::::::::::::::::::::::::::::::::K::::::
HVO_A0404       :::::::::::::::::::::::::::::::::::::::::::::::::::::K::::::
rrnAC1574       MKPTLKRKPSFRRQSKKRPELTEK:::VV::FT:H:GTVQ:RGFY:I:SN:TI:VATSW:

consensus       WTCLLGAITEDGDRFFSRFEEYVTAEHAKHFILALCKEFEDDLLVVLDGAPYFQASAVTD
#oth            1111...1.11..2..1111.11.12.111111..121.111.2.1..1.1..1.11111
pNG5009         :::::::::::::C:::::T:::::D::::::::::E:::E::I::::::::::::D:::
HVO_A0099       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_A0404       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1574       SVTV:::V:DN::S::CWT::NL:RN:GIRLLE::KDR:GEE:V:F::R:G::Y:RDLWE

consensus       LAAR-----------------DDLAFVTLPSYSPELNPVEECWRQLQAALSNRFFDSLDE
#oth            111111111111111111111...11111.111....1..1..1...3111111111122
pNG5009         ::::::::::::::::::::::::::::::A::::::::::::::::N::::W:::::EQ
HVO_A0099       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_A0404       :::::::::::::::::::::::::::::::::::::::::::::::V::::::::::::
rrnAC1574       HVSGERETETVGDSSVSCVRG:::EVWYF::KL::::A::G::D:::EWFKY:LVPDISS

consensus       LTTAIDAALDQLSVPKVSNYF------
#oth            .111.1211111.2.1.11.1111111
pNG5009         ::::::T::::::L:::::::::::::
HVO_A0099       :::::::::::::::::::::::::::
HVO_A0404       :::::::::::::::::::::::::::
rrnAC1574       :KDY:SRGVNAI:E:S:WP:LTGKDST