Home |  Text search
2 genomes BUD3053 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC2616

HVO_1298

 - - - - - -

Pairwise sequence scores
Consensus score3700 rrnAC2616 HVO_1298
2425rrnAC2616 3357 1529
2804HVO_1298 1529 3630 

488 symbols
consensus       MFGLDAAGRLIHASNEFAAHLDADAAALRGRPLEALVGAEDREDLRATRDAVRRASDRES
#oth            ..11.11.1111.11....1.111111.1.1.1111.111.111111.11..11..1111
rrnAC2616       :::::DT:::TF:T:::::L::RTPDE:V:T:V::::T:::::T:T:::Q::SS::::MT
HVO_1298        ::VV::::TV::::D::::::G:::::::::::SGF::DG:WP:V:G:L:::::::GW::

consensus       RRCRCRLSAGDDGPASGRARAEIDIELELAAYRGDGGGYGDGDGDRFDSDSDANRVVGAL
#oth            .1.111.111111.11.111111111..1.111111111111111111111.111...11
rrnAC2616       :T:QVT:------:Q:::S:P---VT:::::-------------------T:DGS:::S:
HVO_1298        :::::::::::::::V:D:P::::::::F:P::::::::::::::::::::::::::::V

consensus       CREAEEPTTARLHTERDRFDHLFDLIDDAVIEFEIVNIEPIVRAVNPALEDTFGYDADEI
#oth            ..11111111111111.1.11.....1...11....111.1..1...11111....11..
rrnAC2616       ::T::TT---------:P:QY:::::Q:::VG:::::FV::::T::::FV::::::RE::
HVO_1298        :::PS:::::::::::::::::::::::::::::::G:::V::::::G::SV::::::::

consensus       RGEPLNDFIVPGDADDEAVNFDQRTADGEANHAIVSRQTADGRREFIYRGIPYDRADGRR
#oth            1..1..11...1.111...11.....1.11.1.1.1.1..1.1...1...1..111..11
rrnAC2616       V:::::EY:::::RVE::::Y:::::S::I:Y:V:::K::::C:::::::V:::T:::::
HVO_1298        :::S:::::::P:::::::D::::::::K::::::T::::W:::::L::::::S:G::KQ

consensus       CGFAIYSDITDQRRARRRLRVLQRVLRHNLRNELNVVLGMAEEARAAAADPAVDHAAARA
#oth            1..11.1.1.11..1111.1..1..........11..1..1.11.111.111.111.1.1
rrnAC2616       ::::M:T:V::S::QK::::::H:::::::::::S::F::S:Y:::N::ES::SL::S::
HVO_1298        Y::S::::::S:::::EH:Q:::::::::::::M:::::::::I:E:T:::R:::G:::I

consensus       ADAADRLAAVSEKARCAAAALNDDRPDQPIDAAALARAVADPRRTRFPAAPFDLALPPSL
#oth            1.1111.11......11111.11111.111..1111.1.1111.111.1.11111..11.
rrnAC2616       L:::::::::::::::VET:::G:-S:::V:::::::S:::SY:---:D::VET:::ST:
HVO_1298        ::HTET:LR::::::T:::V:D:Q:::EV:::TETV:::VE:::::::::T:::D:::::

consensus       PVSGGPALADALANLVENALEHTPEDTAVRIEAERANNDAFLRVLDDGDGIPAIERAAVF
#oth            ..11.11111.11.1....1....1.11...1.11111..11..1...1...1..1.1..
rrnAC2616       ::T::T:VY::VD::::::V::::P::::::T::Q::G:::V::::::P::::::::V::
HVO_1298        :::V::K::Q::::V:::::::::::VT:::::K:CE:::T:::S:::::::E::W::::

consensus       DDEDITNLQHGSGLGIWLARWVAEAAGGRIDYDRRDGWSTVQLRLPLADADDVLTLVDAP
#oth            1.....1.1......1.111..1.1...111...1...1..1.1...1.11111111111
rrnAC2616       ::::::::::::::::::::::::::::G:E:::T:::T::S:::::S::::::::::::
HVO_1298        G:::::Q:S::::::L:VVK::V:S::::V:::::::::::::T:::::G----------

consensus       ESASEPSR
#oth            1111111.
rrnAC2616       ::::::T:
HVO_1298        ------::