2 genomes BUD3057 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0254 HVO_A0505 - - - - - -

Pairwise sequence scores
Consensus score	1834	rrnB0254	HVO_A0505
1538	rrnB0254	1837	1241
1537	HVO_A0505	1241	1843

254 symbols
consensus       MRVDDADAVRRITFDRPDAKNAITAAVARELAAALEDLDPAAHDAALITGDGDAFSAGGD
#oth            ...1.111..111....11...1..1..1..11...1.1.111..111.....1......
rrnB0254        :::E:G-:::::V:::::S:::::::::T:::D::::::::T:::V:L:::::S::::::
HVO_A0505       :::::::G::TV:::::E::::F::D:::::S::::E:T:E:F:::V:::::::::::::

consensus       IQAMAERDESAREAYERVRGTLGRVAEAILSAPVPVVARVNGDAVGAGLSLVAAADFAYA
#oth            .1..1..1.1.1.......1......11..1.......1.........1.1..11.....
rrnB0254        :E::S::E:::T:::::::T::::::SN::::::::::K::::::::::::::V::::::
HVO_A0505       :::::::::T::::::::::::::::::::T:::::::::::::::::T:V:::C:::::

consensus       ARDARFGASFINVGLVPDAGATAILPRLIGLRAAKELAFTGKLIDAERAAELDLINEAIA
#oth            111.......11......1...11....1...11.........11..1...1..1...11
rrnB0254        :SS::::::::S::::::M:::::::::::::KT:::::::::::::S:::M:::::::D
HVO_A0505       T:::::::::V:::::::::::VT::::V::::::::::::::VS:::::::::V:::V:

consensus       AAELDARTADLLETLAAQPTENLALAKEAIHANIGRPLADGLRREARAQSLAYDTDAHAR
#oth            1.....111111...1.....1.1.......1.1.11111..1...11.1.....11.11
rrnB0254        P::::::::::::::Q:::::::G:::::::D:::Q::ET:::::::I:::::::PG:::
HVO_A0505       ::::::TVDETV:::::::::T:::::::::::L::SW::::E:::H::T::::::::EE

consensus       GVAAFLDGRRPDFD
#oth            ..1...11.1.1.1
rrnB0254        ::E::::::T::::
HVO_A0505       ::::::EK:::E:E