2 genomes BUD3059 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1974 HVO_1318 - - - - - -

Pairwise sequence scores
Consensus score	2097	rrnAC1974	HVO_1318
1692	rrnAC1974	2122	1125
1530	HVO_1318	1125	2071

271 symbols
consensus       MDEARASDRSAEPGTVDSIAADLRALGLERGDTLLVHGSLSELGWVAGGAQAVVDALQRV
#oth            .1111111.11..1....1.1...1..1...1.1...1...1....1..11.......1.
rrnAC1974       ::TP:P:::::::V::::::H:::T::::::E:V::::::::::::C:::P:::::::::
HVO_1318        :S::D:VE:VD:::::::L::::::::V:::::::::S:::S:::::::P::::::::T:

consensus       LTDDGTLVMPTHSGQNRDPDNMENPPVPDDWADTIREQMPPFRPAVTPTRGMGAIAECFR
#oth            1.11..1.....11111..1111......1.111.1.11..1..1....1....11....
rrnAC1974       V:ES::V::::::PG:::::::G::::::S::::::::F::Y:::::::Q::::::::::
HVO_1318        ::::::::::::T::YT::SVW:::::::::VEV:G:S::::::D:::::::::VP::::

consensus       NYPAVHRSDHPQHSFAAWGAAAEAIAGGHALDYGLGDASPLAAVYDRAGRVLLLGTGHAN
#oth            1..1.1..1..11......11..1.1...11..1..11...11....1.1..1..11.11
rrnAC1974       T::::::::::::::::::TD:::::::::Y::S::E::::S::::::::::F:::S::T
HVO_1318        :::G:V::E::TV::::::::::E:V:::E:::::::G::::R::::G:D:::::V::G:

consensus       NTSLHLAEHRADIDADRTREAAALLADGEREWRQWDDIELEDDDFQACGDAFERARPSAA
#oth            ........1...11111.111111.11...111111...1111..1.1.1....111111
rrnAC1974       ::::::::Y:::::::T:KH:S:V::E::::::::T::::T:T::::::::::::H:::V
HVO_1318        ::::::::::::FEKT::::R:P::R::::VVVEY::::V:T:::E:V:E::::Q:--G:

consensus       EEGPVAAAEAKLLAQQALVDFAEDWLEANRS
#oth            11.1.111111..1.111....11.111..1
rrnAC1974       :T:T:GVG:S::::::PM::::VE::T::::
HVO_1318        T:::::::T:T::D:P:::::::::F:S::-