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2 genomes BUD3060 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC1140

HVO_B0375

 - - - - - -

Pairwise sequence scores
Consensus score1845 rrnAC1140 HVO_B0375
1468rrnAC1140 1841 958
1335HVO_B0375 958 1841 

247 symbols
consensus       MPMKDVLARIGIGNATVDTVLPSDSVRAGESVRAEVRIEGGSADQNIDKVRFALETRYRS
#oth            11..1..1.....1........1.1..1..1.1...11....11.1.11.1.1...1.11
rrnAC1140       :::::::S:::::S::::::::T:::::::::::::HV::::T:::::S:Y:::::E:K:
HVO_B0375       --::K:::::::::::::::::::T::P::T:D::::::::::E:E:G::::E::::::T

consensus       DDGYRDADIAQWQLAEPLTIQADEQRRRDTSIDIPRETPVTLRNTAVEIETELDIELAVD
#oth            .1..1111.1.11.1.11.1111.11111111...11....11111.11..1...11...
rrnAC1140       :E::K::I:D::::T::F::E:G:K::FE:T::::::::::T:S:::::::G:::SM:::
HVO_B0375       :::::EV::::YT:::S::V:P:::ET::V:L:::HG:::::G:VD:WV:::::::::::

consensus       PEDEDYINVQPTHRLQAVFDALDDLGFSLHAAACEAAAGGLFTSSARFAQEFEFRPQRGE
#oth            .1.1..11.1..1.1........1......111...11111..1.11.1.......11.1
rrnAC1140       :G:::::E:E::::T::::::::S:::::::S:::::::S:::T::N:::::::::::::
HVO_B0375       :::K::L:::::P:::::::::::::::::T:E:::DPH:V::::R::V:::::::TS:P

consensus       FAGAVDELEIVPRFDDDALELFLEVDRRAGLLSELSDADERHTQLTIRAPDPDAIRDRLA
#oth            .1.1...1.1..11.1.1.111.....11.1...11.1...1111.1111.1111111.1
rrnAC1140       :T:::::V::::V::::R:TVY:::::S::::::VT:::::::K:::E:::::::EP:::
HVO_B0375       :::D:::::V:::P:E::::::::::::G:V::::::L:::TV:T:V:TT:VSDV::E:E

consensus       EAIRANA
#oth            11..111
rrnAC1140       ::::ELS
HVO_B0375       SL:::::