2 genomes BUD3082 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2461 HVO_1456 - - - - - -

Pairwise sequence scores
Consensus score	3957	rrnAC2461	HVO_1456
2107	rrnAC2461	2837	1182
3032	HVO_1456	1182	3866

530 symbols
consensus       MAIRSVCRFVPFRPMQPDSSIRVLSANGDRAISRAVQRAVSEAAVDEAATLDAARRALDG
#oth            1111..111111111111111111111.11.11111111111111111111111111111
rrnAC2461       ::L:::::W----------------H::EP:V----------------------------
HVO_1456        VT:L::VQ::::::::::::::::::D:::::::::::::::::::::::::::::::::

consensus       DAYDCLVLGAGFSDGDGLSLLRELRATDDDLPVVVLAPGDADHAVTELVDLGIDAYLDRA
#oth            1111111111111111111111111111111111111111111111111111111.1111
rrnAC2461       ----------------------------------------------------LSS:----
HVO_1456        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       AVLRRAARADSDDSDDSDDSDDTDSDTPAGASPDDELRSRLRRLADQCRKAAAAIDALDD
#oth            111111111111111111111111111111111111.11.11.11111.1111.111...
rrnAC2461       -----------------------------------G::V::S:ME::::VL:::VET:::
HVO_1456        :::::::::::::::::::::::::::::::::::::G::V::::CEH:::RV:::::::

consensus       VFYVYDADGHLASWNARLNELFGLTDADLAGMDADAFFHAADRAAVEAAIEDAIRSGQTS
#oth            ......11.1.11..1..1..1....11.1..1111..111..1..11.1.11111.1.1
rrnAC2461       :::::::::K::Y:::::::::::::GE:S:::PTE::V:D:::::::::::VFE:::::
HVO_1456        ::::::GE:::V:::E::S::T::::::::::S::::::E:::P::KR:V:E:::T:T:V

consensus       VEARAETDDGMLLFQLSGRRLTGDNGEVQGFCGVGRDITDRRQREEQLARQNERLGEFAR
#oth            ....11.11.111.1.1..1..111.1.1..1.......11.11.11.11.....1...1
rrnAC2461       :::::::TE:VVT:E::::L::::D:T::::S::::::::::E::WH:E::::::T:::D
HVO_1456        ::::LP::::::::::T:::::KP::::V::::::::::TH::H:::::Q::::::::::

consensus       LLAHDLRNPLAVAIGHLDLAAEENDPERIDAAADGLQRIEDIINDMRTAARRGTAATDEQ
#oth            1.1....1..1.11.1.1.11.1111.11111111.1.111.11.11..1.1..111111
rrnAC2461       :::::::T::::TS:::E:::::LS:::::::R:::::L:S::E:::::T:E::L:::::
HVO_1456        V:S:::::::S::::F:::ER:T::S:HLERV:TS:T::S::V::VL::::::::VVEFT

consensus       AVAIAAVARRAWDHVETGNAALEPEPPALIEADLERLQRLFENLFRNAVEHGPARDERAS
#oth            1.1111..11..11...1..1.111111111..11..1.......1.1.1..111.1.1.
rrnAC2461       ::D::D::TT::V::::S::V:::P::I:V:::::::L:::::::I:::T:::G::::T:
HVO_1456        P::VE::::::::T::::::::VV:ST:T:H::PG::::::::::::S::::T:-:G:::

consensus       DEDSGVDTTEIAIRVTASPADGTFAIEDNGRGIAAAERERVFERGASRAADGTGFGLDIV
#oth            1111111111111..111.1..11.1..1.1..111111....1.1111.1......1..
rrnAC2461       :::::::::::T:::VPT:-::-:::::::::::PD:::::::P:::::::::::::Y::
HVO_1456        ---------PL:V::::::::::V:V::D:T::D::IVT::::::FTTS:E:::::::::

consensus       RAIAEAHGWSVRAGAAEHGGARFEFAGVDIAADDACCPASAARKSGSDDS
#oth            .11......1.1111111.......1111111111.11111111111111
rrnAC2461       :::::::::T:::T:G:::::::::---::D::T::--------------
HVO_1456        :SL::::::::SV:S:ST::::::::::EF:GE:H:::::::::::::::