2 genomes BUD3098 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2053 HVO_B0286 - - - - - -

Pairwise sequence scores
Consensus score	1056	rrnAC2053	HVO_B0286
694	rrnAC2053	1060	251
613	HVO_B0286	251	845

137 symbols
consensus       MSCPVSPSTGDSSSGAVTGDAADDSPSRIRAREARTNRWRHTIRQGAALWAIIAAAWAAI
#oth            1111111111111111111.11.111111111111.11.11.111.111...1.11.111
rrnAC2053       ::::::::::::::::::::TP::::::::GY:LP:HN::::VVY::VF:::V::::L:V
HVO_B0286       ------------------M::::-----VQ::S::::::CP:::::I:::::::VG::V:

consensus       PADHPMQIAVAISGLFAALLLPTALWCDYRQARAEGSADGRLRATAGALARRIRDAGPGR
#oth            .11..1.11.11..11.11...1..11...11.111111111111111.111111.11.1
rrnAC2053       :TG::F:LG:TL::::::P:::V::::::::::EF:TC:PG:Q:YLSN:I:D:KT::T:Q
HVO_B0286       ::::::::::::::VY:S:::::::YF:::ER:::S::E::V:E::::::D:V:::L:::

consensus       SALGDQRRAFLRCSCNR
#oth            111.111.1111.1111
rrnAC2053       ::::::::E::::----
HVO_B0286       ---:SST::SSS:::::