2 genomes BUD3100 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0186 HVO_B0223 - - - - - -

Pairwise sequence scores
Consensus score	2201	rrnB0186	HVO_B0223
2030	rrnB0186	2202	1779
1950	HVO_B0223	1779	2074

291 symbols
consensus       MLIRLPDYCKISHMEYTRAESLDRIRATIEAGNPIIGAGAGTGISAKFAERGGVDLLIIY
#oth            1111111111111.1...1...1.111.1.1.1.1.........................
rrnB0186        ::::::::::::::::::E:::L:L:E:V:Q:::::::::::::::::::::::::::::
HVO_B0223       -------------:K::::::::::E::::::D:V:::::::::::::::::::::::::

consensus       NSGRYRMNGRGSLAGLLPYGDANEIVCEMGHEVIPVVEDTPVLAGVNGTDPFRDMDVFIA
#oth            .......1..................1..........................1.1..11
rrnB0186        :::::::S:::::::::::::::::::::::::::::::::::::::::::::Q::::L:
HVO_B0223       ::::::::::::::::::::::::::V::::::::::::::::::::::::::::S:::E

consensus       DLRRRGFSGVQNFPTVGLIDEDSGFRQNLEETGMGYDKEVDMIREAAEQDMLTCPYVFNE
#oth            ..1....................11.1.............1.....11.1........1.
rrnB0186        ::K::::::::::::::::::::::::::::::::::::::::::::S::::::::::::
HVO_B0223       :::::::::::::::::::::::SY:K:::::::::::::E:::::S::G::::::::T:

consensus       EQAAAMAEAGADVIVSHMGLTTSGDIGAETALDLDAAAERVQAHHDAAKAVRDDVHVICH
#oth            1..11.1...........................11.............1.11..1....
rrnB0186        T::RE:::::::::::::::::::::::::::::E::::::::::::::D:NE::L::::
HVO_B0223       ::::::T::::::::::::::::::::::::::::D::::::::::::::::::::::::

consensus       GGPIAWPDDAAYVLNNTDGVVGFFGASSIERLATEEAIENQAREFKEIDIQ
#oth            ..........1...11.1..............1...............111
rrnB0186        ::::::::::T:::EH::::::::::::::::P::::::::::::::::::
HVO_B0223       :::::::::::::::::E::::::::::::::::::::::::::::::EF-