2 genomes BUD3106 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1547 HVO_1742 - - - - - -

Pairwise sequence scores
Consensus score	1493	rrnAC1547	HVO_1742
1370	rrnAC1547	1491	1192
1315	HVO_1742	1192	1491

186 symbols
consensus       MAIYVFRVWLQPNPPLGFEPDEEVWRDIEIDGSHTLAEFHEAIFQAFDRWDSHAYEFITR
#oth            .11.......1.1.......1....1.1.1.......1......1.11..1.........
rrnAC1547       ::::::::::H:::::::::G::::::::V::::::::::::::E:YE::::::::::::
HVO_1742        :TT:::::::::H::::::::::::H:L:::::::::T::::::::::::E:::::::::

consensus       DDNGIALRSYVHPQLYDGGASWRPMDDEEIDRFIEQAVPDDASEAAKERFRDLQSNPPME
#oth            .11..........1.....1...1..1...............1.1......1......1.
rrnAC1547       :ED:::::::::::::::::::::::V:::::::::::::::T:::::::::::::::P:
HVO_1742        :::::::::::::M:::::P:::T::::::::::::::::::::E::::::E::::::::

consensus       GNAAETTIDELDLDDLGALSYIFDMADNWDHYIELQDAREGSLDCDPIVVDEQGTAPSQY
#oth            ..1....1....1111.....1...1.1.1...1..11.1..1.1..1...1........
rrnAC1547       ::T::::V::::::EV:::::::::::::::::G::E::::::::::::::K::::::::
HVO_1742        ::::::::::::PE:::::::T:::G:S:E:::::::T:T::M:G::V::::::::::::

consensus       PDLDEQ
#oth            .....1
rrnAC1547       ::::::
HVO_1742        :::::-