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[L] (XerC) COG0582 Integrase
2 genomes BUD3108 5 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi

VNG5079

VNG5218

VNG6076

VNG6450

 - -

Hbo3089

 - - - - -

Pairwise sequence scores
Consensus score2805 VNG5079 VNG5218 VNG6076 VNG6450 Hbo3089
2805VNG5079 2805 2805 2805 2805 1022
2805VNG5218 2805 2805 2805 2805 1022
2805VNG6076 2805 2805 2805 2805 1022
2805VNG6450 2805 2805 2805 2805 1022
1022Hbo3089 1022 1022 1022 1022 2940 

395 symbols
consensus       MSNNDA-----------TPGVRGLETLLDDRMVSLESP-QTQQITRVAVNNLFQFLT---
#oth            ..11.11111111111111.1.111111111111.1.11111.1111.111.11.1.111
VNG5079         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5218         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6076         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6450         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3089         ::TP:SDRDSGEFESEESD:T:AQSEVAAAIARY:R:NGDSS:YRST:ESV:SK:E:WLR

consensus       --ENNDVDSVADVDEQDAR---DWVIHLVKEDDLAANSIRTYFALARATFGWWQRSGEIG
#oth            1111111.111.11..11.111.11111.11.111.1.11..11111111.111.1.111
VNG5079         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5218         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6076         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6450         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3089         RRGKDTF:AFE:EG::LL:RYS:RLAQR:EA:GIS:S:AQ::YNVISGFL:FCV:D:ALT

consensus       QNPLATTTAEEVLPSKSNDVEQQFWTADARERLLNYVDERAHAALENDSSDAARAFRDRS
#oth            1..11111.1.1..1111.11.....111.11.1111111.11.1.1.11..1111...1
VNG5079         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5218         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6076         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6450         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3089         R::ALADR:R:P::RDDE:HS:::::REV:RK:VQHTNDA:YE:I:S:GM::RQEV:::A

consensus       LVYILADTGVRGAEICSVSRDNR--RNGLRWTDVDLEAGVMTVLGKSGDQESVSLPGVTS
#oth            ..11..1.......111..1...11.1..1.11..11.1111.1..1111.1..1.1111
VNG5079         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5218         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6076         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6450         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3089         ::HV::Y:::::::VFR::G:::EG:Q::T:AR::TD:WTFR:W::AQEW:D::V:KQAR

consensus       EKLARYRRLVDAP-AEWPVIPTGDATSKYRAVRKQLREREYGDEAIEGVLEDCEIDEVLR
#oth            .1.1.1.111.1.1.....1..11.1...1...11.11111.1111111.111.1.1...
VNG5079         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5218         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6076         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6450         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3089         :A:R:W:TVL:P:S:::::F::AH:P:::A:::DA:-----:TDDANAR:DGA:V:D:::

consensus       EYEVAPPALTTEGARTLLKRLCGEADVDIDGDYLKPHGGRRGLGDELYGEVAAESAQEVL
#oth            111.....1......11.1.1111.1.....1111...1........11111111..1..
VNG5079         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG5218         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6076         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG6450         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3089         DED:::::I::::::RV:E:IADT:G:::::KPPL:::A::::::::F-RTDRGL::D::

consensus       RHKSIETTHASYRERRAEDLSADIEKVRYSNTDEE
#oth            ....11..111.1111.111111111.1111111.
VNG5079         :::::::::::::::::::::::::::::::::::
VNG5218         :::::::::::::::::::::::::::::::::::
VNG6076         :::::::::::::::::::::::::::::::::::
VNG6450         :::::::::::::::::::::::::::::::::::
Hbo3089         ::::LS::KEA:SHID:SERGEAVSD:L-----D: