Home |  Text search
2 genomes BUD3143 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3542

-

Hbo1562

- - - - -

Pairwise sequence scores
Consensus score2455 rrnAC3542 Hbo1562
1321rrnAC3542 1834 361
1495Hbo1562 361 2119

330 symbols
consensus       MSDAESQQGEAASATIDISVDRLAPGRRHLQYILLAAAALAGAVFVVLPEWLLPSFLPDL
#oth            11111111111111111111111111..11.1111111..1...1..111111..11111
rrnAC3542       ::::::::::::::::::::::P:::::FV::T::GL::::::::::T----F::V:::V
Hbo1562         --------------------MI:SWL:::::-:VF::C::I:::V:::::::::::VVT:

consensus       ASGSAAQLQLVASVAAALIGLFGIRTLVRPDDEALPQIKGQQPRDPYRDDETGDRSTELL
#oth            1.1111111..11.1.111.11.1111.11111111111111.11.11111111111111
rrnAC3542       G::T:R::::::::S::V::V::LY:V::TQ:S:::P:::S:::::::::::::::::::
Hbo1562         ::S:L:SSS::L-:::G:V::Y:::V::S::E:ETS:TTV:Y:QT:--------------

consensus       DELLEPEAAQAESRRLVGDDINEAAEKAVPDERWDQRRGRRAAYASEIRNRLREAARDAI
#oth            11111..1111.1111..1.1111111111.111111111111.1111111..1..1111
rrnAC3542       ::::::::T::::GE::::::D:LL::I--:G:V:PYN:LE:S::::::::::::::QML
Hbo1562         -----::T:VH:V::V::E:V:G::ST:::::K:K:::H::R::GT-----::T::V:::

consensus       AETAECPREAAAREVAEGRWTDNRRAAAFLAQDDAIGPPIRMRLRDWAAGERFDRAVQAA
#oth            1..11111.1.111.11.1...11..111.1111111..11111....1..111.1.111
rrnAC3542       V::::ISM:::::::RT:S::::::::T::GGP::P::::E:Q:::::S::G:::K:E::
Hbo1562         :::TG::::T:TEL::::::::KP::R:Y::::TS:H::L:T:V::::::::TE::::DT

consensus       TAAIRRIRRGDADVARAELAAIESTASQSVAHADAPAATTDEFADAEPPYTPSEDADTEK
#oth            111.11111.111111111111111111111..111111111111111111111111111
rrnAC3542       ::E:::LQ::E--------------------::---------------------------
Hbo1562         VS::LS::D:::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       IAMERNAALAETDGGAPAKSTTDTDEGDRR
#oth            111111111111111111111111111111
rrnAC3542       ------------------------------
Hbo1562         ::::::::::::::::::::::::::::::