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2 genomes BUD3152 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnAC3540

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Hbo1564

- - - - -

Pairwise sequence scores
Consensus score4046 rrnAC3540 Hbo1564
2612rrnAC3540 3752 849
2283Hbo1564 849 3619

561 symbols
consensus       VVGMSQFGPEWHDAVDTMGALDNRAAAFSAALAGGIAVLASLALGLAVGDPIGALAGAGG
#oth            1111111111111111111.1.111.11..1.1111..11111..1..11.11111111.
rrnAC3540       -----------------:T:::::P::S::::T:TV:::V::V:::::V:::PV:::F::
Hbo1564         :::::::::::::::::V::P:SS::P:::S::F::::V:TF:::V:::S:L::VVT:V:

consensus       ALCIAAGAGALRSNARERRAGGSILIIIGAGLFCGTALLATDYWSLAVAIGLFGAAPLVG
#oth            1111111111.1.1111.1.1...1111.1111111111111111.1.11.1111111.1
rrnAC3540       G::::::VW::::E::::I::::::::::::V::::::::::::::V::L:FPL::T::V
Hbo1564         :SVVGWS::E:T::ENS:::V:::STLV:TS:-------------:::S:::::PE:F::

consensus       IDAAFALVPPADAFDRLAALLDDSFGVVSRAIIHSGVAIAGFAALAAAVRLHWAFTAALT
#oth            11.111..11.1.1.11111111111111111111..111111.1.11.1111111111.
rrnAC3540       :::SSG:::::::T:E:S:M::E::-----VVLVV::IVTIVC:V::::::P:V:VRVV:
Hbo1564         SV::::::--:V::::F:G:TE:TV:::::::::::::::::::::LL:HF:V:S:::::

consensus       GFGLHSLLSRMSPLVGFLTIQAEVLLALLLIDRAIERLERLTPAPTATTDRALDRIDALD
#oth            111.11111111...11111111..111.1111.1.1..111.1111111.1.1.111.1
rrnAC3540       ::S::-------:::::V:L::G:::::::L:::T:T::SWV:::::::::::E:L:L:G
Hbo1564         TY::F::::::::::SV:V:EL:::FIV:T:EP::::::::::E-----T:V::::T:::

consensus       TNAWDIAAPLRAAWGLQAGTAFLPATSWARMLFDRFLDSLPMLGSALAFLLQSGFIHGPL
#oth            1111..111111111.111111111111.111.11.....11..1.111111..1111..
rrnAC3540       ::W:::DT::K::V:::LLV::V:T---:Q:::::::::::V:::::RVVF-::PL:L::
Hbo1564         VV:V::::VP:GV:I:V:::GY:T::::::VM:EQ:::::S:::T:V:::::::::T:::

consensus       AAGIAALLAILAVNRARQWLLQWLGDDPGQSLARAAGGIVAASGALLGALALSAAGITRR
#oth            111111...111.111.11111...1..111.1111.11.1111111.1.1111111111
rrnAC3540       ::::L::::::I:E:L::::::::::::::::::QT:S::::V:L:::::::T:::V:::
Hbo1564         GFVV:L:::VF:::M::LVVMF:::S::SET:SL::::F:VG:V:FV:G:IP:LSS:---

consensus       VAPTFSEGGHLQIMARVYGSAATLLAGVLGLLAVLRGIIALIAELVEAEFLPRAAAGFAL
#oth            .11..11.111111111..1111..11.11111.1111111111..11.1111111...1
rrnAC3540       :::::TG:::-------::::TV::L:::ISV:::::L:T:L::::G::V:S:RV::::T
Hbo1564         :ST:::::PL:::::::::TG:::::V:V:::F:VLL:L:V:VY:::H::V:P::G::::

consensus       GSGLLFIAGLLGAARDAAAILTLAGSAAALLVWDAGANASDIGQQLGRDAETRRGEAVHA
#oth            ......111..1.1111.1.1111111.......1.11.111..1..1....111.1..1
rrnAC3540       ::::::VMT::::E:GL:P::V:V:::::::::::::H::S:::::::::::TDS:F::V
Hbo1564         :::::::::::V::T:::::V:V:TVG:::::::L:E::V:V::T::T::::::::::::

consensus       AGSAAVLAGAILLAAISRYVLGPLAVPAGRAGLSFSSVLALALLLLAIAACALALAAHNE
#oth            1.11..11..11.11111...1.11..111.11111111111.1..11.1111.11111.
rrnAC3540       T:T::::::::::VLFV::::I:V:::TTS:::::::::::G:V::::::F::::N::E:
Hbo1564         :::I::VT::VV:::::L::::::S::::::--------RF:::::VV:L:GF:V:TY::

consensus       GPHTSGDRSGSRGERTADDSD
#oth            111111111111111111111
rrnAC3540       :::::::::::::::::::::
Hbo1564         ---------------------