2 genomes BUD3158 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0623 - Hbo2433 - - - - -

Pairwise sequence scores
Consensus score	2456	rrnAC0623	Hbo2433
1641	rrnAC0623	2408	785
1600	Hbo2433	785	2356

327 symbols
consensus       MDGIDGQLRKGEMSRMASANRARYRAFGLDVASALDFPELPEAVVEEAAEGRADVFIREE
#oth            11111111111111.11111111.1....1.1.1111....111111111.1...11111
rrnAC0623       ::::::::::::T::::T::T:T:E::::T:R::F:V::::S:--:T:PG:::::T:T::
Hbo2433         ------------:T:TD:RG:F:::::::::::T:T::::::T::T:S:::D::::V:VG

consensus       RIPFRGESAADGPAFHAETEREFILLYDAARIRILDGREIAVDPAPDAPERDLRHTLLGP
#oth            11.11111111.111111.11.11.....1111111.11.1......111111.1111..
rrnAC0623       :::-:PL:::S:ST:::V::::YY::::::TV:::::KS::::::::V:SEV:::V:V::
Hbo2433         TV::D::TPD::::VTF::PE::::::::C::TVSQ::::V:::::::T:::V:W:V:::

consensus       ALNHLLDQRGHLVLHASTVAIDGRAVAFVGESGAGKSTTAGACAAAGHRALGDDVAAIAL
#oth            .1.1..1...11...1.1.11............1..1...1.1111...1.1......11
rrnAC0623       ::::::::::YF:::::::S:::::::::::::V::T:::M::LLD:::I:S::::::::
Hbo2433         :F:F::H::::::::G:V::V:::::::::::::::::::::F:::::::::::::::RF

consensus       DDAGPVVRPGFASIKLDDDAAAALDGGLEPVTDGGENQPHAGRPRERFGRRADQDADPVP
#oth            1.1....11.11.1..111.111111111.111111111111..11111111.1111...
rrnAC0623       ::::::::S:YP:M:::PE:VE:F:PPV::-----PE:V:S::::HFY:L:H::P:T:::
Hbo2433         T:D::::Q::::::::H:::::T:G:::V::::::::T:T:S::D:::Y:T::V:S::::

consensus       LAAIYRLEDGDDIEVDALRPDAAVAALGRNAYTLGAQQARDQAILAFDACGEIVDMTEIA
#oth            .111.1.1..1111.11111111.11.11.1..1.1111111.111111.111.111111
rrnAC0623       :ER::L::::ET:::::V:::KQ:M::VD:T:::::LE:DG::VSN:T:::::::::::K
Hbo2433         :::V:::V::::VT:TP:PSV::::E:::::::V:T::R::E::::V:R:LSV:ESVPV:

consensus       RLRRPRRLDALPDVAARIQQELGSESC
#oth            1.1...11.1....11.111.11.111
rrnAC0623       ::::::T::M:::::::V:S::K::::
Hbo2433         T:T::::F::::::VS::E::V::---