2 genomes BUD3165 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1834 - Hbo0318 - - - - -

Pairwise sequence scores
Consensus score	1809	rrnAC1834	Hbo0318
1195	rrnAC1834	1735	399
1013	Hbo0318	399	1599

237 symbols
consensus       MLDNNQLAEARDRDGDAADDRPDAANEGLERDYEAVGFENGDPLANRDYDEYPRKDDILD
#oth            11111111.111...11.11...111111.1.111..111.1..111..1...11.1111
rrnAC1834       ::::E::K:::E:::ER::E:::E:DV::::::P::::S:::::L::::S::::S::::S
Hbo0318         -MTF:PF::GW:::::::E:::::V::WF:P:-:E::Y:V:L:::SV::::::E::ELY:

consensus       ADAGDIIREIAAHRLINGARDIAAELRADEETAARALEIHDADRRESHGGEDDAQKSEDE
#oth            111111111111.1.11111.111..1111111111.11..1111111111111111111
rrnAC1834       P::SGVLETLVE::::GSV:::SD:::::VTVVSK:::L::V::P::V--:::::P::S:
Hbo0318         :ES::::::::::P:T:::I:V::::GVS::::::V:G::::EQ:GT:::TPTVE:TV:G

consensus       IELPHPDDADGIVVARDQFRGAIHRNARILEYLYIRCGLGIAEIREFLDIARNHGRGAEK
#oth            .1..11111..1..111..11111111.1.....11..1111.11.1.1111.1111111
rrnAC1834       ::::-----::T:::TE:::SP:Y:D::L:::::VD::YS:::M::::ESE:::::::::
Hbo0318         :T::::::::::::R::::K::P:D:G:::::::::::::VS::E:V::::E:-------

consensus       PRWTVDATDGRRELARHRLIIGDEDDGERDDIRRGGASLSESETSGTDGLTIQAGDF
#oth            11111.11.1.11.1111.11111111.1111111.11111111111111111111.
rrnAC1834       ::::::N::I:T::EMVG:L:::G:::::::::L:::::::::::::::::VSTS::
Hbo0318         -----::V::::M:::::::---:EEY:PHPLN:S:P--------------::::S: