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2 genomes BUD3189 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnAC0311

-

Hbo1927

- - - - -

Pairwise sequence scores
Consensus score3317 rrnAC0311 Hbo1927
2363rrnAC0311 3128 475
1429Hbo1927 475 2208

435 symbols
consensus       MPKHLIGFEQMMSRRRVLALCGLAIAIGAGCQGESPFGADTQQSPPGREPAESETDTGPA
#oth            1111111111111..1..1111111111...11111111..11111111.1111.1.111
rrnAC0311       -----------:Y::::::::::::-::::::::T---:::ETVT:V:S:VV:::::::P
Hbo1927         :::::::::::P:::D::GFGSVTL:LL:::TSG::::G::::::S:T::::TT:P:-S:

consensus       PAVQVGDAAVAPGLVSMNGPDSIGTYQDADGQFLIARIEIDRQSGRDREAFSLAFDGETY
#oth            .1.1.1111.1.11.11111...1.1111.1..1111111111111..1.1.111..1..
rrnAC0311       :::T:T::::M::V:-VP:T:::-:V:P::::::VLTTT:-:G::V::T::::R:::S::
Hbo1927         :H::::SVS:::S:::::S:::::::G:R:K::V:::::M:E:TK:::::V:V:T:::::

consensus       DPEPFRNGLRRRGEWGRDFSADQEIDDFLLFRLPEPGDAEDAQIQWPNGEHRLNDAQRDR
#oth            11111.11111111..11111111111111.11.1111.111111.11.1111111111.
rrnAC0311       S::T:::::Y:D:::::Q:T---:TGGP:V:N:::T:S:S:T:LS::G:KWTPPE:V:::
Hbo1927         :ST:V:DVV:H:SL::V:S::::S::::V:::V:K:L:::S:T:::S::::::::E:VS:

consensus       LNRPLPSFDIRELGAPDQVTEGAEPTLSITVENTGDAAGRFVAALNRSGPRTAYAPTGAI
#oth            .11.111.1111111.11..11111..11..1.1.111.11.11...1..11..1.1111
rrnAC0311       :QI:::::::-T::G:E::::P:K:::::::T::::T:::Y:I::::T:::V::::V:RF
Hbo1927         ::::PTT:EV::FS:::T::S:T:S::TL::::V:S:D:T:::G::::::Q:::M::T::

consensus       DGELDAEATATITHDGKPPYVDDTEPREVIYRLRAPKGSTSRDGDISRSTRKPQPNRSAL
#oth            11111111..11..1111.1.11111111111111111111.1111.1111111111111
rrnAC0311       ::K:KP:E::V::::::T::::::::::::::::::::::T:HTES::::::::::::::
Hbo1927         SI:V::G::::W::SYT::V:-------------------:::::::-------------

consensus       SRSKTDFASQKVTRQPCAGAEAPPQTPSRSDRFQLILSSASSMASVTSSASPLLRSLSAD
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC0311       ::::::::::::::::::::::::::::::::YS::::::::::::::::::::::::::
Hbo1927         --------------------------------::FVM-----------------------

consensus       WMRASRPWSGPRSSVARLSNWRAGDARASLASSLPVSSAADSSSSLADASSSRVIRGNLQ
#oth            11111111111111111111.11111.1.11111111111111111111111111111.1
rrnAC0311       :::::::::::::::::::S:S:SS::R::::::::::::::::::::::::::::::::
Hbo1927         -------------------:::D::E:::VG---------------------------:E

consensus       MNEKTIRLTRAGLFK
#oth            111111111111111
rrnAC0311       :GT::::::::::::
Hbo1927         P::------------