2 genomes BUD3417 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG7141 rrnAC2816 rrnAC3406 - - Hmu1400 - - - -

Pairwise sequence scores
Consensus score	1177	pNG7141	rrnAC3406	rrnAC2816	Hmu1400
771	pNG7141	1215	512	545	480
770	rrnAC3406	512	1232	525	448
788	rrnAC2816	545	525	1193	549
698	Hmu1400	480	448	549	1112

163 symbols
consensus       MTIDQLEEYGLEQMDDDDIAAFLARRSVGVLGLPTDSAPYLLPLSFGYDGESALYFTYVL
#oth            1122222221232..232.311.33322....1..223.112.1.112.1223...1122
pNG7141         :::::IA::::::::E:E:Q::::TH:T:::::::ADV:::::::Y:F:DGAC:::::L:
rrnAC3406       ::FE::::::ML:::SG::EKT:E:K:I::::V::::::L:R::::W:::::::::V:::
rrnAC2816       ::::T::AA::TH:::S::::::SNQR::::::::K:G::MI::::::::D:S::::FIG
Hmu1400         -------------:::ES:R:::RS:G:::::::::GP:::::M:::S:::GT::::::A

consensus       GSASRKAALTERAAAARFLVYDIESAFNWRSVLLAGNIERVPEDEWAAIAAQLDNAWRPA
#oth            .22.2.331112.33121.1112213.3.2..213.3.12..11113313332232.1.3
pNG7141         :E::Q::E:::::GRG:::::::DT::E:Q::M:::D:SS::::D:SE:T:MTQ:::::N
rrnAC3406       ::D:::VTVSDQ:DV::::I::::TT::::::::T:T:::::D::RR::EG:I:TS:K:D
rrnAC2816       ::::::QR:::A::D:TV:::KV::M:H:E::::Q::::A:::S:::DL:EV::G::::E
Hmu1400         :DH:E:R::::::T::S:::F:AP:P:S::::VVR:P:::::::::DSLGDE:SDG::::

consensus       VFEAAATDGAVALYRFDIDRRAGIRQAGLPPGFRRE-------
#oth            2113.32323222.113.2322.22132.1.222312221111
pNG7141         TLQT:T:S:G::::E:E:TEL:::::T::A:D::ENIEP::::
rrnAC3406       :::R::ETE:T:::::Q::D::::K:LE:::EL:S:SSSSRPE
rrnAC2816       :::D:IK:DD:TI:::H::K:E:L:H:::::::E:::::::::
Hmu1400         A::::V:E:EISV::L::E:QD:FE:SS::::YAH::::::::