2 genomes BUD3422 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0609 - - Hmu0172 Hmu2137 - - - -

Pairwise sequence scores
Consensus score	1449	rrnAC0609	Hmu0172	Hmu2137
1020	rrnAC0609	1401	821	810
1131	Hmu0172	821	1504	945
1186	Hmu2137	810	945	1427

207 symbols
consensus       MTESEDADPVEEEQAEEQAEDPEEEP-----EETEEDAPDIEPDERADIDLDDLDLDTDA
#oth            1221122111.1.2211122221211111111...1.2.1.11..2..22..2.11.111
rrnAC0609       :V:T:QV::A:Q:SD:----------:::::G:::::::::D:::K:::S::E::V:P:D
Hmu0172         ::V::TEE:::::P:D::G:ET::::ADEQG::::::L:::::::Q::--::G:E:::E:
Hmu2137         --M:A:::A:::::P::::P:::P:::::::::::D:R:A::D:::::V:::::::::::

consensus       IEEEAGAA-ADEQDDDDGDDT------DDENTDETASQPALPDGESWGDQYVMMLALLLG
#oth            1..1.11211..211.21.21111111.212.11..2..121...1..1...2..1....
rrnAC0609       V:::::::S:::S:P::Q::::::::::EQG:::::::::MH:::T::::::S:::::::
Hmu0172         :::Q:APD:-::GG::S::E:TGTDDP:S:E:::::T:::::::::::E:::T:::::::
Hmu2137         :::::::G::::::::E::TS:::::::::::ES::-::TV::::::::::::::S::::

consensus       EIAESSDGETGKDAEAIEELARSPPVELDDAVDEWLQDAGMGADFSPGKAVAIGTAGLAL
#oth            ....11...11.1..1..1...1....1.11..1..121.111.21..12..1.....11
rrnAC0609       :::::T:::P::T::D::::::A::::::EN::::::Q::::::VP::::::::::::VA
Hmu0172         ::::A:::::::::::::D::::::::M::::::::::::I:::T:::TK::V:::::::
Hmu2137         ::::::::::S::::::::::::::::::::::Q::AES::EM::::::Q::::::::::

consensus       VVILTETDAAQDAISDLADDL-DLDL-
#oth            .12.....2.1.1111121111112.1
rrnAC0609       ::L:::::::S:LMDG:S:Q:T:A::L
Hmu0172         ::::::::M:::::::I:E:M:::S::
Hmu2137         :IV:::::V::::::::T::::N:Q::