2 genomes BUD3424 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG5131 rrnAC3384 - - Hmu2199 - - - -

Pairwise sequence scores
Consensus score	1533	pNG5131	rrnAC3384	Hmu2199
782	pNG5131	1409	623	573
1140	rrnAC3384	623	1548	823
1100	Hmu2199	573	823	1568

212 symbols
consensus       MADEIPFAGDPADSREAIMRATFRALKQYGYAGLSIQRIADEADLSKSTFYHHFDDKDDL
#oth            122221121212112111.1..12..12....1.......1.111....1...111.2..
pNG5131         ------------------:Y:::S:::K::::E:::::::S:LNF::::L::::S:::::
rrnAC3384       :S:G:::::E::::H:::::::::::RE:::::::::::::::::::::::::::G:E::
Hmu2199         ::P:T::P:::D::::::::::YC:::::::::::::::::::::::::::::Y:::H::

consensus       LLSFQNFILAEFNRIFQIESTNDPEANLRTFVRLILDDGIACK--EQSAKNAVLGAYVEL
#oth            .1..22.1.2.121212211122.122121..211..22222111.2121221.12.1.1
pNG5131         ::::F::L:D:LEQFCKSS:::E:KKE:LD::DVL::E::TQ::::::::GEI:A::I::
rrnAC3384       :::::E:::T:::::::::::G:::QDIK:::S:::::FPD:V:::TPT::::::S:::M
Hmu2199         :T::VD::::::T:V:SL:AGDG::::::::::::::PTT:E:VS:E:PAST:::T::::

consensus       RAQAVQDEDIREKFTETDRRFARQIAQIIEAGIAQGVFADVDPEQTARFIITILAGQILQ
#oth            .1..111222..11.11.22.22.112.112.122...21.1.12112.221112.2221
pNG5131         :S::IH:TKY::RI:R::K::VK:::V::D:::DK:::QP:E::E::E::LA::N:ILM:
rrnAC3384       ::::::NP:F::::::::EL::::LV::::D::E:::::::::DTVS::M::::D:V:::
Hmu2199         ::::::::T:::::::V::S:ED:::E:V:N:V:S:::R::::::::T:VS:LV:::TFR

consensus       QSTRNDAPFAAVRAAIDEYIREELIRNDA---
#oth            21..212.2221122211.1212.22221111
pNG5131         G:::KR:::QQL:QNLI:::QT::FVES:TRS
rrnAC3384       SA::::N:V:E::DT:::::E:T::L:T-:::
Hmu2199         ::::D:D:SE::L::F:D:V::S:L:D:::::