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2 genomes BUD3425 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3526

rrnAC3528

- -

Hmu0994

- - - -

Pairwise sequence scores
Consensus score1161 Hmu0994 rrnAC3526 rrnAC3528
773Hmu0994 1109 596 584
859rrnAC3526 596 1158 645
846rrnAC3528 584 645 1155

166 symbols
consensus       ------MDLKRLFNDDDAVSPVIGVILMVAITVILAAVIASFVLGLGDQASQTAPQASFS
#oth            111111.11.1112..........................1........21111.....1
Hmu0994         :::::::::::::D:::::::::::::::::::::::::::::::::::T::-::::::G
rrnAC3526       ::::::::I:Q:IH::::::::::::::::::::::::::::::::::::Q::T::::::
rrnAC3528       MRADTT:E:::F::::::::::::::::::::::::::::T::::::::V:N::::::::

consensus       FDYDS--SGGNNADGAVTITHDGGDQIAANNLFVRGDFDSASDIDA-NGEWDSDNNGATS
#oth            21.1.111122222.2..1..1...2.2221121..22212.222212111112221211
Hmu0994         :E:::::-----DK:E::V::Q:::::E:Q:IVF:::V::::SST:VES:G::W:D::DA
rrnAC3526       W::E:GA::S:::::I:::::::::T::L:S:Y:::T:G:N::TSS:::K::THKSAS::
rrnAC3528       T:::::::::GGSE:::::::::::S:KGS::::::-----:G::D:T:::S::L::D::

consensus       GSNSLVKAGDRTEVRVNNRAYEIRVVYEEPNGDTSATLAQDSGPNA
#oth            ..21211..221212.1222112111112121...1..2211..2.
Hmu0994         ::T::I:::MS:I:G::GD::::SL:::::GS:::T::TT::::T:
rrnAC3526       ::E--::::SN::I::D:N-:DL::I::P:E:::::::S::T::E:
rrnAC3528       ::::K:V::::AT:D::S:SF:F:::FQSD:::::::::SA:::::