2 genomes BUD3426 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2291 rrnAC2399 - - Hmu2908 - - - -

Pairwise sequence scores
Consensus score	4019	Hmu2908	rrnAC2291	rrnAC2399
2754	Hmu2908	4604	883	1827
1470	rrnAC2291	883	1508	1451
3081	rrnAC2399	1827	1451	4040

621 symbols
consensus       --------------------------------------------------ISGDFTVTFS
#oth            111111111111111111111111111111111111111111111111112112211121
Hmu2908         MIGHKNALRLLVALLVVGSVIPAPAVAQSDNEYSHQFTGGPQGVVVDQSN::::::::V:
rrnAC2291       ::::::::::::::::::::::::::::::::::::::::::::::::::----------
rrnAC2399       ::::::::::::::::::::::::::::::::::::::::::::::::::M::TV:::::

consensus       SKEVEGRGGQKQLLAQERLDPGTEDGIAMANEGAYDNITAEVEGEDSGEPEFHAERAVGI
#oth            221121221222212222222212222222121111221221222222222222222122
Hmu2908         :T::T::S:::T::::K::G::::EK:VFM:::::::::V::TIH:::::::M::SD:::
rrnAC2291       ------------------------------------------------------------
rrnAC2399       T:::::S::SS:P:VK:EF:TT:T::V::::L::::TV::T::::GTPTTST:GG:::MP

consensus       DGPTIIGGTGGDADIQCNIDEKIGRATNPGFEQLDCTA-PGDNGVNTSQTDAQQLKIDIY
#oth            122222121111112112221222222222222211121122221212211121212121
Hmu2908         :V:Y:::H::::::L:::K:::LFSM:::MV:VV:::P::V::::D::::::E:::::L:
rrnAC2291       --------------------------------------:---------------------
rrnAC2399       ::Y:ML:::::::::::G:M:S::::VDS::T::::::N::TTT:::TG:::::T:L:::

consensus       QSAQNAKAQADNYQTTLDNYLQDTETQARIIGKNAYIRALNNGSSKAAAKTEAKNAVADY
#oth            112112112212111111111211211111111111212111111121111111211211
Hmu2908         ::G:::::SS:V::::::::::::::::::::::::V:::::::::::::::::::::::
rrnAC2291       ------------------------------------------------------------
rrnAC2399       :::::S:::::::::::::::S::K:::::::::::::S:::::::S:::::::Q::Q::

consensus       YSTHQRNLIAEWNLQIENWEYNRGTAENES-----LDRNDDADYQREAPTYLN-------
#oth            112222111121121222221212212211111112222221212222211221111111
Hmu2908         ::::E:::::K::::VS:Y:::::V:V::::::::::Q:EE:V:::T::::::GTMGANG
rrnAC2291       ------------------------------:::::------------------:::::::
rrnAC2399       ::VK:E:::::::T:::H:K:L:S:::S::GIDSRFV:V:::::YS:PY::YD:::::::

consensus       -----RYFANSGSNSLTLSNGTTVDAATIEFDEVARDGGDAINNNE----TLGIESGYLD
#oth            111112.22121222211211111222122221122122222212211111222211221
Hmu2908         DYEQFP::::V:::::::::::::S:S::V::::Q::ST::TH::KGEAG::TMT:::V:
rrnAC2291       :::::M:---------------------------------------::::----------
rrnAC2399       :::::::TG:::TETK::V::::::S::F:VE:::D:::TT:::Q::::::V:::::V::

consensus       SNDDTRDINTSSGDTFDGP------VEAIDLADYEAKWAAIQSQNDQVQNNMDTLAENTY
#oth            22222222222222122111111111222222211222221211222122211.11....
Hmu2908         WE:SVG::::VY:V::T::TSDYED:::::::E:::::SE:::::T::::D:::VV::::
rrnAC2291       -------------------::::::----------------------------:::::::
rrnAC2399       ::I:::WLGV::T::T::::::::::KMVVFE:::TSY:::E::S:T:ES::::::::::

consensus       SAYQAGEINNSDLVDPYVLSSQQSPGDDFQGWAAAQLTLLGTNSPENFDQIGSFNVTTES
#oth            11..2....11......1.1111.1.111.1.2.............11.11.1.....11
Hmu2908         DE::S:::::T:::::::::NDF:A:NEY:S:S:::::::::::::AM:TM:E:::::AD
rrnAC2291       :::::::::::::::::::A::::::::::::::::::::::::::::::::::::::::
rrnAC2399       ::::Q::::S:::::::M::::::::::::::T:::::::::::::::::::::::::::

consensus       GTQYEGVLFSQENPASGQFENGTTYNTSNIGGTQYVVTSDRIVELDGEFTIDSISTQDGQ
#oth            ..111...1..1........11...1.1..1.1.1...1..1........1...1.1..1
Hmu2908         ::THT:::M::S::::::::VN:::D:A::T:P:F:::A::L::::::::V:::E:T::E
rrnAC2291       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2399       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       TVQNVTIEKTTYETA--NVTELKQQYEDLAYKRAQIEAREKALKQSAGGGALGGGSVPPV
#oth            111....1....1.211...1.111..1.111..11....11.111...121.1111111
Hmu2908         SRE:::::::::D::DI:::Q:VEL::Q:NKE::EW::::QN:RGG:::F:F:NSTSLGI
rrnAC2291       :::::::Q::::::T:::::::::::::::::::::::::::::::::::F:::::::::
rrnAC2399       ::::::::::::::S:::::::::::::::::::::::::::::::::::L:::::::::

consensus       VALAVIGTLLAIVVLQN----
#oth            1.1.11.11.11111111111
Hmu2908         I:-:LA:GM:LLRNRDDGGRY
rrnAC2291       :::::::::::::::::::::
rrnAC2399       :::::::::::::::::::::