2 genomes BUD3427 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2516 rrnAC2517 - - Hmu3020 - - - -

Pairwise sequence scores
Consensus score	521	rrnAC2517	rrnAC2516	Hmu3020
271	rrnAC2517	515	86	98
263	rrnAC2516	86	506	153
307	Hmu3020	98	153	575

74 symbols
consensus       ------MDPDRSDAQEQNAAD-DAADEQLPAVVEERADGSERCILYPPNIDGSDAEANWL
#oth            1111111211212121222221112222.211112111111.2.1.111212212.22..
rrnAC2517       :::::::C:E:::::Q::TT:G:::EKL:TVEH:PA:G:GQ:S::::::ST::EL:::::
rrnAC2516       ::::::::S:TRSTS:VT::T:::D:GT:::::RS:P:::::L:C:A:DV:TT:V:KQ::
Hmu3020         MSQPSSGE::P:I:P:PLPQE:EFPS:::S::::::::N::::::::E:::PV:::TH::

consensus       AVDADFAVSLADCR
#oth            1.11111.122121
rrnAC2517       ::SS:LL:::D:VQ
rrnAC2516       S::::::::TLLM:
Hmu3020         ::::E:::DV::::