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2 genomes BUD3438 3 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC0607

 - -

Hmu0174

Hmu2139

 - - - -

Pairwise sequence scores
Consensus score660 rrnAC0607 Hmu0174 Hmu2139
267rrnAC0607 625 142 156
453Hmu0174 142 711 302
449Hmu2139 156 302 692 

97 symbols
consensus       MNV----SARDMRKWAEAGAWALALAAIADLLAE--RARSSQDADRDDRPDHATLTDLDL
#oth            1211111221222111..2212.22222221122112211112212111..2.2..11..
rrnAC0607       ---::::-M:HTDI:L::MGA::LSC:VYEV:TG::--TR:T:G:::::::W::::EC::
Hmu0174         :T:::::::Y::Q::::::F:L:::VW::W:I::ML:D::::TEMNV::::S:Y::::::
Hmu2139         :::NLPSTT:QV::T:::V::V:IV:LLL:::VS::Q:::D:P::P:EY::::V::::::

consensus       DAIADGEQRRIRTSG-GDTLRLEGEDVEEGNGEDE--
#oth            1112..1111...1.1..11..1112.1112112211
rrnAC0607       Q:L:::DAQT:::::T::LY:::AV:::TNTD:--::
Hmu0174         :::G:::::::::T:::::::::::P::::D::EGEQ
Hmu2139         :V:E::::::::::::::::::D::H:K::::D::::