2 genomes BUD3442 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2041 - - Hmu0120 - - - -

Pairwise sequence scores
Consensus score	2622	rrnAC2041	Hmu0120
2319	rrnAC2041	2599	1970
2273	Hmu0120	1970	2637

348 symbols
consensus       MSTDRGRIRISGFDADRVEEREPLSDWTAQRGTDRGTEGRWQRAWRQFRDNRSAMIGLST
#oth            ...1....1.1...111.11........111..111..1..1....1.11..1..1..11
rrnAC2041       ::::::::::T::::::::S::::::::E::::E--::S::G::::E::::::::L::Y:
Hmu0120         :::Q::::Q:::::TEQ:T::::::::::G-:::::::::::::::::KS::T::::::V

consensus       VAIMGILALFARPVEIAGITVQPISLAPFDPQAILFLQPGLNVGAYDAPSLAHPMGTDAS
#oth            ..1.11.11.....1...1....1....11.111.1111.11.1..11......1...1.
rrnAC2041       ::L:::::::::::T:::V::::F::::Y::S:::YV:-::D:S::E:::::::F:::G:
Hmu0120         ::::VV:TT::::::::::::::::::::E::KS:::E::S::::::P::::::::::::

consensus       ARDMFSRVLYGGRASISIGFIVVFITAAIGLVYGAIAGYYGGRVDEVMMRILDLIFAFPA
#oth            1..1....11...1.1....1......11......1......1.......11.11....1
rrnAC2041       :::V:::::::::F:L::::::::::::::::::::::::::::::::::T::::::::G
Hmu0120         G:::::::MV::::::::::V::::::GF::::::V::::::W::::::::V:TV:::::

consensus       LLLALIIIAILGGGYWQLVAAFAAFGWAGYARLIRGEILKVKQNQYVMAAQALGARDRRV
#oth            .1...1.1.1..1...1..1..111..............1..1.1..1..1.......1.
rrnAC2041       :::::::V:V::K:::E::L::T:::::::::::::::::::E:E:::::K:::::::::
Hmu0120         :V:::V:::::::::::::::::FP::::::::::::::S:::::::T::::::::::S:

consensus       IFRHIVPNAIAPLIVQASLSIGTVVIGVAALGFLGLGLPPGSAEWGTMLDATRETIIQGP
#oth            ....1....1...1.......................1...11.......1....11...
rrnAC2041       ::::V::::V:::V::::::::::::::::::::::::::::::::::::Q:::::V:::
Hmu0120         :::::::::::::::::::::::::::::::::::::F:::TP::::::::::::L::::

consensus       GGSIPWWATVFPGGAIFIFVMAMNLIGDGINDALDAQENEDVARGGEN
#oth            ..1....1.........1...1..1....1.......111..11..11
rrnAC2041       ::T::::V:::::::::L:::S::::::::::::::::G::::::::V
Hmu0120         ::::::::::::::::::::::::M::::V:::::::S:V::EQ::G: