2 genomes BUD3445 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1705 - - Hmu2258 - - - -

Pairwise sequence scores
Consensus score	2550	rrnAC1705	Hmu2258
2022	rrnAC1705	2557	1115
1643	Hmu2258	1115	2274

344 symbols
consensus       MADSNVTGWLKTAIRGDLAATQGTFATAAASTGMAGPSPSDAESLPIADARRRIGSLAAP
#oth            .11.11111111111..11.11111111111111111111111111111..11111111.
rrnAC1705       ::E::::::::::::::T::::::::::::::::::::::::::::LET:::::::V:::
Hmu2258         :T::T----------:::T:--------------------------:::::DTLTT:VE:

consensus       IDRTDRIPLSVAEGRVLAEEATARDPIEAAEIAVDDALFARGHRIRPGDLGLLRAAGVDD
#oth            .1...11.....1.....1111.11111111.1.1.11.11..11.11.1...11...11
rrnAC1705       ::::::::::::V:::::TP:::N::::G:::S:G::V:EQ::Q:::::V::::::::SE
Hmu2258         :E:::TV:::::::::::::LV::ESSP:DG:::::R:::::::L:ST:::::KV:::::

consensus       LLARQRPQVGILPTGDELAQRDAGAGQRVETAAFTLAQHVDRWGGKVTYRDPVADDAHAL
#oth            1.11...1...1......1..1..1111...11...1.1............1.11.11..
rrnAC1705       ::V:::::::::::::::::::::ES:Q::::G:::::Y::::::::::::::::::P::
Hmu2258         V::V:::T:::V::::::V::E::::E::::T::::S::::::::::::::T:GE:R:::

consensus       RAAIQRDLTRDAIVITGTEAGDALREIVADLGEIHADRLAIDPGQRTAIASVENRPVLLL
#oth            .1.1......111.1..111..111.1..1..1111.11.1...11111.1..1...1.1
rrnAC1705       :M:V::::::EL:::::::P:::::::::E:::VL:::::::::H::G::V::::::V::
Hmu2258         ::::::::::::L:V::VT:::PVH:V:::::S::V:GV:S::::TV:V::::E:::::V

consensus       PESPGAARVAAVQLLRPLLAELAGAPLPAHAEHRAALSAHVDSANGVRTLTPVALADGTA
#oth            ....1111.1....1...111111......1111.1.111.1.11....11..111.11.
rrnAC1705       :::::::::G::::V::::KTF:H::::::P:T::T:T:::::Q:::::F::::VG::::
Hmu2258         ::::VDCL::::::::::V:::S::::::::H:H::::DS:E::S:::::V::E:::HV:

consensus       TPLGDGQPDLADAIRADGWVSVEAADAGIAAEASVGVENWDHAP
#oth            ...111111.1111......1.11111.111111.1.11.1111
rrnAC1705       :::PG--V:::T:T::::::::P::E:::DTGTT:T:::::YL:
Hmu2258         ::::::::T:R:V:::::::T::EN:D:L::::::::ID:E::-