2 genomes BUD3449 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3508 - - Hmu3279 - - - -

Pairwise sequence scores
Consensus score	2220	rrnAC3508	Hmu3279
1844	rrnAC3508	2175	1466
1842	Hmu3279	1466	2212

301 symbols
consensus       MSQAINSILVPTDGSDGARIGARRGIDLAATADADLHVLSAVDARDIEPDLNRFGADDRS
#oth            ..11.1.........1..11..1........11..1....1..1.1...1.111111111
rrnAC3508       :::T:::::::::::::::::::::::::::IG:::::::::::::::::::---::GQT
Hmu3279         ::P::D:::::::::E::TV::Q::::::::::::V::::V::T:E:::P:S:::GK:::

consensus       DRERLLEDEAERAVDSIARLARTHLSGRITGAVERGIPFQAINDYVDAHDIDLIAMGTQG
#oth            1..1.1.1..1.....1.1........11.11..1.1......1..11....111...1.
rrnAC3508       E::::::T:::::::::::::::::::Q::T:::S::::::::::::T::::::V:::::
Hmu3279         :::Q:F::::K:::::V:G:::::::::V::T::::V::::::E::E:::::VV::::H:

consensus       RTGLQRLLLGSVAEKTLRTAAVPVVAVPPDADEIEIGDQRYENILLPTDNSDGADLAIDW
#oth            1..11.11.......1....1....1.1111.11.1.111.........1.1..11..1.
rrnAC3508       Q::FE:VV:::::::::::::::::T:T::G:IV:::::::::::::::G:E::::::E:
Hmu3279         :::::::::::::::V::::S:::::::ST:::::P:EGS::::::::::::::SV::::

consensus       GITLAEIYDAMVHTIYSVDTSRLGGSERAAEIHDALERTGRDALDAVRRRARAADISIAG
#oth            .1...11.1.1.1.1......111.1.111...1...11.11..11.11...1..1.1..
rrnAC3508       ::::::::::T:::L:::::::F::V:GS::::::::E::QE::ET:HE:::D::V::::
Hmu3279         :M:::TL:G:::Y::::::::L:S:::::S:::G::::V::::::::::::::::::V::

consensus       NIASGPAARAILAESEDHDIDLIAMGTHGRSGIDRYLIGSVTETVVRNAAVPVCCVPMQE
#oth            ..1......1..11.11......1........11...1...........1........11
rrnAC3508       ::::::::::::SY::E:::::::::::::::LT:::T:::::::::::::::::::::-
Hmu3279         ::G::::::V:::::G:::::::V:::::::::::::::::::::::::D::::::::T:

consensus       L
#oth            1
rrnAC3508       -
Hmu3279         :