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2 genomes BUD3451 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnAC2838

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Hmu3106

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Pairwise sequence scores
Consensus score2564 rrnAC2838 Hmu3106
2080rrnAC2838 2562 1112
1596Hmu3106 1112 2048

333 symbols
consensus       MRTELFALAAAVGLTGAAVGPGLAAAADEAGNADAGNTLALGVSQADDEDATISVTANDS
#oth            ...1....11..1.111.....11..1.1...1111111.11..1.1.111.1...1.11
rrnAC2838       :::K::::Y::::::LL:::::::::::S:::T:::::::V:::::::GS::V:::Q:ET
Hmu3106         :::::::::M::T:V:::::::VV::D::::::------::S::V:Q:::V:::::::::

consensus       AVENASVAVEGADNSSYEGIGNYTTDDNGEVELDAPEANVTIDVTATADNRTATTTADLT
#oth            1....1.1.111111..1.1.1....11.1.1.11..1...11.......1........1
rrnAC2838       G:::::::::T:::T::V:T::::::S::T:G:P:::Q:::V::::::::H:::::::::
Hmu3106         :::::T:D:G:EEG:::::::S:::::D::::::S:::::::S::::::::::::::::-

consensus       LAENALNENQFDAFGQQVSAYVNDLLDDDRRHGGIGPAVAAFVQANNPGNAPAHAGPPAH
#oth            1111111111111..11.....11..1111.111...1..1..1........1.....1.
rrnAC2838       V:P::T:VTE::T::LE:::::::::S:EN:T::::::::S::T::::::::D:::::::
Hmu3106         :G:EY:V:::TS::::::::::QS:::G::::--:::Q::::::::::::::::::::E:

consensus       AGGDNENDDNDTHPSERQGPPADIFGDNENAFENETDEDRRGPPEDAGPPEDRGPGSDDA
#oth            11111.11111111111111111111.1.111.....1.1....11...11111111111
rrnAC2838       VT:E::S:::E::::::::::::::::D::ET:::::-::::::K:::::::::::::::
Hmu3106         ::P:H::ETG:---------------:::T:::::::::E:::::H:::-----------

consensus       ENETDRENETDDDRRGPPEDAGPDADRDADDDEAEEEDDEAETEEPEDETEEQDESEEQD
#oth            1111.1.....1.1.....1...1111.11.1.1111...1....1...11111111111
rrnAC2838       :::::D:::::::::::::::::PE:::D::V:N:T::::N:::::::::::::::::::
Hmu3106         ----:::::::E:E:::::H:::::EE::T::::S:T::::::::S:::-----------

consensus       EDDDADDDADSDDDDDGDRGRPDDAGPPNARGN
#oth            111111.111....11111.1..1.111111..
rrnAC2838       ::::::::T:::::::::::::::::::DE:::
Hmu3106         -----E:G:E::::G----:P::H:---::G::