2 genomes BUD3452 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1157 - - Hmu0746 - - - -

Pairwise sequence scores
Consensus score	3063	rrnAC1157	Hmu0746
2084	rrnAC1157	2940	1118
2097	Hmu0746	1118	3018

388 symbols
consensus       MPESTDRSVECPICDEAFDPTAAGGWCTNPDCGEWQHDDEIESTSAADFEADAETADDAD
#oth            .1..11.1.1..1.1.1....1.......11....1111.1111.11.1.1.11111111
rrnAC1157       ::::-::T:K::::::D::::V:::::::::::::K:T::----::::::T:DGVP::::
Hmu0746         :S:::S::::::L:G::::::::::::::SE:::::Y:G::::::DE:S:::::::SEDE

consensus       AIPEDDDEADAMDDRPLAADDDADLEDPGDNQADADPDDEALADAASDTGAPEAEDEADG
#oth            11..111.1.1111111111111.111.11111.111..111.....11111.11.111.
rrnAC1157       L:::GT::::P::G:SV::SGE::--T::G:TV:D:S::::S:::::::::::::::TV:
Hmu0746         :T::::P:G::VS:N::FG:::L:::::T:P::::E:::SP::::::-----:ST:T:::

consensus       ATDAATDEEERADTEAADNAERRDNAADDGGAQPSEDADGADDADDETQEADDDAALGSC
#oth            1.11..1111111..1111111111111111111.111.11.111...1.1.1111111.
rrnAC1157       T:ET::EH:ME:::::EP:T::EH:E:::TPD:::S:S::D:EIF:::::::::S:TIT:
Hmu0746         ::::::::P::PS::D::D:PE::D:VGE:::ET::P::T::::::::G:S:ET:T::::

consensus       PDCDRALDADAAFCPACGADLDAHRPAEEDEDDGSLDACPECDSAVDDDAAFCANCGEDL
#oth            .1..111.1111..11..1.11111111111.111.....1.111.11.11..11.....
rrnAC1157       :::::E:::::N::V:::::VQDIT:G----:::::::::S::T::::::S::V::::::
Hmu0746         :E::T:V:PSD::::G::E::::::T::::::ETT:::::::G:D:GP:D::::S:::::

consensus       DAHRGARDTSLAACPACGADTAEDDAECAACGNALDAHAGQDADDATAPDRLALSAEGRD
#oth            .....111.1111111111111111111.11.111.111111111111.11.1..11.11
rrnAC1157       :::::G::::T:DST:GS:T:::TES:S::T:::V:TL:S:ST::::V::K:V::V::::
Hmu0746         ::::::DE:T:D:::G::S:VGP:::F::S::ED::::R:S::SGTV::S::::::Y:QS

consensus       ITVEDDDRIGREIRAALADAGRDDDEAVRIHREHVRFDRDDDQFYLVDLGDNPTRLNETR
#oth            11.1.1111.....11.1...111.11.1........1.11111.1........1..1.1
rrnAC1157       :::::G:::::::::::L::::PE:::::::::::::::QSEGY:::::::::::::::Q
Hmu0746         VV:G::ETV:::::SL:::::E:::TS:L::::::::V:::::::V::::::::E::G::

consensus       LQKGDREPIQPGDELRLSDVVTLDIRAA
#oth            .1.......1.....1..1...111111
rrnAC1157       :::::::::::::::E::G:::MT::::
Hmu0746         :S:::::::G::::::::::::::VETP