2 genomes BUD3453 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0079 - - Hmu1255 - - - -

Pairwise sequence scores
Consensus score	3871	rrnAC0079	Hmu1255
2780	rrnAC0079	3765	982
2073	Hmu1255	982	3321

509 symbols
consensus       MAAVGISDVFRYGTRFLAHLLVVAGAGGGLIAAGNLLIQNGFLSGLSANAGFRAPTTTAG
#oth            .11..111.1.......11....111.11.111.11.111.111111111.1..111111
rrnAC0079       :S:::LT::Y:::::::GT::::::V::::::::YV:::::SF:S::G:::Y::V-----
Hmu1255         ::V::::G:::::::::::::::TL::IV:VLT::::--G:::T:TV:SP::::::::::

consensus       WAGIAIAAAGGLALIGGLLGLLHKLIADATAAGTLAARSAQEDAADLAAGSADADDQAAA
#oth            11.111111.1.1111.11..11..1..1.11..1111111111111111.11.1.1111
rrnAC0079       -L::VVG:L:::L:LS:::::T::::::::M::::::QT::P::S:V::::PP:S::T:T
Hmu1255         :::V:::L::V::T:::VS:::F::V::G::V::---::VL:SE:E:DSP::::::G:D:

consensus       DTAAGDAANAEEPASDSDDPGPVARSEPEPAAPRDTDQAADPAAAEEASGEEDVAEPVAD
#oth            1111.1111.1111.1.1.11.1111...111111.11111.11.1111.111.1.1111
rrnAC0079       :::D:S::S:T::::K::::M:-EST:::::VS:::EP::::::::P:T::S::S:::::
Hmu1255         GVV:::ET:::PVQ:::P:T:::::::::SQ::QE:::PG-:QP:S:R::P:Q:::----

consensus       SQPNADSAGDQGIRAPAQQQDDPRDAAAPSAASRAAEAGTDAAPTDAADEDPLADADAAQ
#oth            11.111.11111111.1.111..11111.1.1.1111..1.11.111111111..11111
rrnAC0079       :E::T:::::S::H:::::HS::S:::::::::DT:T::::G::VT:::::::::::S:T
Hmu1255         -::D:E:PSE:--:P:G:V:::::QPNR:V:E:::S:::-::Q:::ESTSG--::PT:R:

consensus       ADDPGADDEPADDRGRLDADDADEPPSADELDAPADAQDAAEPAAAQDEPLSEQQPADNQ
#oth            1.1.111.1..1.11111111.11..1111111.1111111.111111.1...11..111
rrnAC0079       ::::V:::V::T:T::::::::SK::T:::TM:::T:E::V:T::::::::::::::E:V
Hmu1255         S:Q::PL:::::::S------::::::RQP::E:G:S:PG:::T----:S:::TE:::D:

consensus       AANEPASDRPIDDPTGAQPEPADLAGDSETVEPRDEPSEQSDRDLLAEDAAEEPEPSSEQ
#oth            111..111111..11111.1.1.11111111..11...111111111111111111.111
rrnAC0079       :GP::ET---V::T:-:E:S::::::::::::::S::::::::::::::::::::::T:P
Hmu1255         P:::::::::::::V:S::::D:--------::S::::------------------::G:

consensus       AEWTPPDPAEFDQGQEEQDAADDGEAGIDEQAPADDWETEPDADKQPTGVGSLDADEADQ
#oth            1.......1..11111111111.1..111.11.11.1111.11.1111111111111111
rrnAC0079       Q:::::::::::T:S::PT::::W::--::::::::::::::::TE::::::::::::::
Hmu1255         ::::::::E::E:H:ST::DQS::::::E:SP:RE:----:FV:::--------------

consensus       HDAARDDTRLLDDEQAADPSEGARSTDDLQEGAADDQPGDEDDESMQDEDASQDAEDDAD
#oth            1111111...1.11111.111111111..11111.111.1.11.111.11111.11111.
rrnAC0079       :::VTQ::::::ESG:::T:G:P:T::::FG:TD:::::P:V:::::::SE:::::TP::
Hmu1255         --S:::E:::V::::FD::V:S:T:WE::::T:::STT::::E:TTT:G::YE:DL::E:

consensus       EDSTLADDGVTGFDTKGDDDPLSDALDDE
#oth            ...111111111.111..1.....1..1.
rrnAC0079       ::::::::::::::VS::::::::P::::
Hmu1255         :::Y-------S:E::::G::::::::G: