2 genomes BUD3454 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3388 - - Hmu2200 - - - -

Pairwise sequence scores
Consensus score	1654	rrnAC3388	Hmu2200
1017	rrnAC3388	1486	600
1237	Hmu2200	600	1661

225 symbols
consensus       VSAVTLMCKALADTGVFTQDTAVATVLVAAGRRRLRGLAALIAGIGAGAVSGAAIALAAQ
#oth            11111111111.1..111111111111111.11..111111111.11...11.1111111
rrnAC3388       ------:S:SS::::---------------::H::GS:::V:GW::::::VL:TV:::V:
Hmu2200         ::::::V:V:::V::::::::::::::::::T:::::VGG:L:::VV::::::::GYV:V

consensus       AFLGLGLAEQGAIGLGIALGGGIGGVSNLAATDDPGEPTDETMTVGADARRTPEPQPADL
#oth            111111.111111...1.....1.1.11111.111..11......1111111.1.1.1..
rrnAC3388       SVFS:::S::VT::::L:::::L::::Y:LV::S:::T:::::::S:::KH::::::V::
Hmu2200         ::::VP::MS::V:::::::::::V:T:Y:::G:-:::V:::::::REP::-:T:T::::

consensus       FDDHPDPVLYFADDGHGPVVRAANAAFAATFDVPADALADAALAEALLAAEDADEVDAAT
#oth            ..1.......11.1..........11111.....1.111111.1..1.11111...1111
rrnAC3388       ::G::::::::::E::::::::::ES:G::::::S:R:SGT::S::::V:-GI:::::E:
Hmu2200         ::::::::::VV::::::::::::::Y:E::::::::V:::P::::V::G::::::VT:V

consensus       ADGADLDTVALCEAADEPRQFRLRTAGAGDDGYLLLTPRRRAQEG
#oth            111.1..1.111111.1..1..1....1111...11..1111111
rrnAC3388       VST::::V:::ST:P:::::::::::::PST:::::::LGT:G:-
Hmu2200         ::::G::::VT::T::G::P::V::::S::::::VY:::::D:P: