Home |  Text search
2 genomes BUD3462 2 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1419

- -

Hmu1727

- - - -

Pairwise sequence scores
Consensus score10098 rrnAC1419 Hmu1727
6933rrnAC1419 9571 2719
5884Hmu1727 2719 8769

1328 symbols
consensus       MCNSWYVIEYVRVGQLGGWRPGCITRSGCGVVGKCCHHRRDTDRSSGQQTIGDINDDANV
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC1419       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu1727         ------------------------------------------------------------

consensus       ELAEEVLLSVDQSFQRSDTNESVEIPDRVRSDITVTDDATYNLTLNGRSACSTGNRSLQT
#oth            111111111111111111111111111111111111111111111111111111111111
rrnAC1419       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu1727         ------------------------------------------------------------

consensus       IRYQENGQQVGYQGGGVWRMREGGATMESPPALNYDDGALNVQFARISGNQIDGNEIAAR
#oth            11.1.1.11...1.....111.1111.1....11.11.1.1.1.111..11111.11111
rrnAC1419       ::::::::::::::::::::T:S::::S::::V:::Q:::S:S::N:::Q::G::SV:I:
Hmu1727         MQ:E:D:TV:::E:::::ES:::STV:::::::T:K::S:::::Q:V:::IT:S:::T:Q

consensus       SNATAERAHNAALQMALFTNLSYEDARIGSASSPSLECAPARLANATLFINNSQFARAWA
#oth            1...1..11111.111.1.1111111111.11.1.11.1.1111...11.11.11.11..
rrnAC1419       :::::::P:E:::::::::DV::::::T::F::::Y::P:SQV:::::T:K::SY:::::
Hmu1727         V:::D:::L:DE:SVL:Y:::T--PSN:S::T:Y::T::::::Q:::V:::D::::GG::

consensus       RWARDRFNDRRVDVQPANSAEPRENIHIRFALGDVSDPEFAARNITTQRDPSNPGQATVN
#oth            11.11111.11.1.1.11.11.1.11111.1.....111.111.1.11111.11.111.1
rrnAC1419       D:::STYD:QY:T:T::-::::G:T::V:::::::::SK::VD:::V:S::::::::::S
Hmu1727         :Y:E::::::::::::S::VS::::VS:T:E:::::L:::S:::V::K:Y-:DT:PLY::

consensus       AMVQNEGGLKDEQTITLKHNRPGANEEATDSRDVSLNGGESIRMKFEVPAGDLDIATAGP
#oth            .1.1.1...111..1.111111.11111.1111.1.1....1111111111111111.11
rrnAC1419       :::T:T:::::T:::::::::S::PS:::ET--:T:G:::::TV-----S:TV:::V:K:
Hmu1727         :T:::::::SS:::V:FTFED::G::VS:::::::::::::K::::::::S::SSV:::T

consensus       HNATIESDDDSAFRAIQFTSGNGTPELDITGSSAPAQARLNDDLSADVTVENRGEMTADR
#oth            111.1.111111111111.11111.111..11.1.111111111111...1.1.1..111
rrnAC1419       ::F:V:::H:T::ER:VY:TVP:::S:::::::M::T::::QVP::T:::T:N::::::Q
Hmu1727         YD::::TE:E:ES::V::::::HV::FQ::SV:::S:GQVG:::TV::::::::S::GT:

consensus       AVAFGFNGSTNATRNLRLDPGQSRTLDFGPPLPTNENGSHDLEVQTDDDSYSQPKDDGSY
#oth            1.11111..111.11.111...11.11111111.111.11.11.1.11111111111.11
rrnAC1419       E:L:LV:::V::::::IV:::::::V::::SM::::::TY::::E:E::T::::::::::
Hmu1727         :::Y::D:::EN:TM:::H:::TK::SY--::S:TTD::::WT::::GT:-----EQ:TV

consensus       FIVGDGGTFEISDTDAPGGAEAGNTATINATIGNTGDIRGTRDINIHIRNDSNGAEIDDE
#oth            .1..1111.1111111.11111.1.1111...1...1111.111111.11111.111111
rrnAC1419       :::::S:V::VTSVSP:::V:S:E::::G:::K::::::S:GSVT:::KDE:-:::::SK
Hmu1727         :-::T:P::T:::::::KH:G::::FWL::::::::QLN::::::LT::::T::NVVT::

consensus       DRDFSINGTRADAEDEAITNASGSITAPSYGNYEYLIDTGNDAQNGGFTVGPAAPPNFDV
#oth            111111...111111.11111..11.1.1111.1.111.111111.1....1111.1.1.
rrnAC1419       S:::TL::::NG::E:T::LT:::L:::::S::T::VE:P:::V::T::::SS:::V:::
Hmu1727         :QTV:::::I::SS:::TV::::T::T:--:T:::K::::DMV:T::::::::RY:::I:

consensus       TSLRFSNNPVRKENQTTIEADIKNTGRTDDTQMLHISRDRDADKAPNRQLDPGDDETVSQ
#oth            ..111111..111111.111111...111...111..1111111111111...111..11
rrnAC1419       ::VSV-:::::P::K::VSFTVS:::G:T::::::::::WG:::SSEV:::::K::::T:
Hmu1727         ::::::DD::V:GD:V:::::::::::V::::PVK::TE::ILT::::HV::::VV:::T

consensus       TFDVASEEGLLGEANRINFETDNNTAARNLNVLAQNPIGERDDGQIIANRRINGSIRLLG
#oth            .11.1.11111111111111.1.1.1111.1.1111.1111.111111.1.111.11.1.
rrnAC1419       ::T:P:::::Y----:L::M:E:Q::W:M:::-QL::VIK::GSEVTT::::::::V:K:
Hmu1727         :V::::PTFV:::::E:TV::::::V:Q::E::::E::::T::::::::E:LDV:V::::

consensus       AELEGNNRDWCNPRYRSCLGSFRTNGGYQRYGIINDRVEMSLEIRNQSESDIPLWRDLGN
#oth            ....1111111111111111111111111111.1111.....1111.1.1111..11111
rrnAC1419       ::::S:TV:----------------------T:SHT:::::::V:::::YE::::::V::
Hmu1727         :::::S::E:::::::::::::::::::::::::::P:::::L:NG:T:::--::QS:PG

consensus       DFEDGDVNGPEAEQRLLNGDNHPYNETATLEKNDRAILFATSYRCDEYQSTDVRFPDLIE
#oth            .111....1.1..11.11.111..11.1.1..1111111....1.11.11...1.11111
rrnAC1419       ::::::::::Y::E::VT::D:::EY:R:F:::TTFS::::::W::::T::::T:----:
Hmu1727         :---::::H:::::E::::Q:-::::::::::D::::VT::::::SY::Y:::::::::T

consensus       IDNNEQDAVGERCANRDRTRISINNNENNDRVDIRRDGDKIRGGEEFEGQAANAQRRLED
#oth            1111.1.11111.111111.1.111111111.1.111.1111.111111..111..1111
rrnAC1419       ::G::Y:T--:::VDH:EV:::VD:P:::QN:::L:S:::TP:----Y:::SS:::::::
Hmu1727         LG:T::::::KE::::G:::L:::G:GED:::V::K::ES::::::::P::::Y::NVKQ

consensus       MLGQERLNNTGHDNATLDLADGERVLIYELSDRDASIENASQSDDPDYNDALALFRVNSI
#oth            ..111...1..11111.1.11..1.11....1...11.1.11.1.......11..1.1.1
rrnAC1419       :::E:::::::S:::::S:::::L:FL::::E::::P:::YS:::::::::M::::::::
Hmu1727         ::-:G:::E:::----:::SP::::::::::::::T::Q::::G::::::::V::K:L:K

consensus       NRSLSKPASFRIIDLDAPARVRRGNAETITATINNTGGREGNADIQFAFDGSAAETESTG
#oth            111..1..11111.11...1.11111111...11.1..11.1111111.1.1111..1.1
rrnAC1419       EE::::::-::V::V::::::DET::H-V:::VK:V:::S:::TLTST::::::G::-:K
Hmu1727         ::T::P:::YE:T::S:::S::::DS::::::::::::Q::ET::::::G:TTV::::::

consensus       EIEPNEKKQFTFDFGTGSKGTEQSFGYNISLADEPRERRAGNITVGELREQHMQVDQFRA
#oth            11..1.1111..111...11.11111.11111..111111.111..1111111..11111
rrnAC1419       ::::::T:::::V::::::P::::YL:::::S::-:K:WG:::Y::::D::F::::SV::
Hmu1727         KL::G::TTV:::VP:::T::---:::TVTV::::T:N:::QL:::VP:SP:F::T::TP

consensus       DATAIDRDESANAEINITNVGAEDDIAEVALYTRNTDDANDTFTEADSTSGSGLANNADE
#oth            111.111111111111.....1111111.1.111.111111.1111.111111.111111
rrnAC1419       SG-:::S:G::::T:::::::D::G::::::::K:::::SS::::::::TT:::T:GET:
Hmu1727         ::::VE:G:TVGI:TT::::::TS:TQT:E:--::VTGS:::V--V:TV::VS::G:::T

consensus       QLNLDLPTDTRGNIRYTVQTRNDRAAKQRAFVNRSNVKINDTQGINIGAEKYNESELIER
#oth            111.11..111.111.1.1.1111111.111.11.1.11.1.11111.111.11.1....
rrnAC1419       :V::SM:::-:::YT:Y:::::GTS:::SF::G::::VV:::::::::::::DT:T::::
Hmu1727         T:P:::::H:N:T:::::S:ED:::IP:::Y::E:H::::Q:E---V:LST:::::::::

consensus       RGGAQRMTVELNNRGGLGDDRDVNLTITNQSDGSAVHSDSTNVSVGDGDIRDLDKYPAWA
#oth            11111....111.1.11.11.1.1.....1...1111111.1.1..1.1111111..11.
rrnAC1419       ::::::::::VF:N:TV:SE:E:::::::K::::::FTG::::T::S::L::V:::::::
Hmu1727         KS-VP::::K:::::::::::::K:::::::::TT-:::T:T::::::E:KP:--::GY:

consensus       GFDTDSMGIDEGYYSYEIEVENDTASGARDDTATGEIFLHEDGTVDQSGASDNDSPINID
#oth            11..1111111...1.111.11.111.111.11...1111.111.11.11111....11.
rrnAC1419       :Y:::---L:P:::T::VT:Y::::::SI::::::::Y:K:---::E:::TT:::::S::
Hmu1727         T:::S::::S::::::S::::D:---:::E:YW:::L:V::::::E::--::S:::::V:

consensus       SDQIEIGS
#oth            .11.11..
rrnAC1419       ::T:T:::
Hmu1727         :G:::V::