2 genomes BUD3467 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0088 - - Hmu1250 - - - -

Pairwise sequence scores
Consensus score	2623	rrnAC0088	Hmu1250
1904	rrnAC0088	2525	1131
1850	Hmu1250	1131	2366

341 symbols
consensus       MSTDARPMPVTERAPESGTVRRDIAFHETDARTLRLDLYDAAAASGPRPTAVLFRGGAFR
#oth            11.1111111111111.1..111.1...1111..1..1.11111...1.11..11....1
rrnAC0088       :::T:::::::::::::V::Q:::P:::V:GE::T::::::::::::K:V:::V:::::T
Hmu1250         VT::T-----------:::::SE::::::P:::::::V:EPRE-::::::V:::H:::::

consensus       SGDKGQLARQARALAAAGFLVIEPQYRLADEATFPAALIDAKAAIEWARTEGAEYGADPG
#oth            ..1.111.11.11..11.11.11.1....1.1......1.1...1..1.1..11..1.11
rrnAC0088       :::::EF::H:LD:::D::::::::::::P:W::::::V:V:::::::::::ES::::TS
Hmu1250         ::E:T:::E::::::D::YV:VT:E:::::::::::::::::::V::C:V::::::I:::

consensus       RLAAAGHSAGANLATLAALTADEPGFEPELYPGASSALAAAVGWAGIYDFRALDEAHDVP
#oth            .1111.1......11.111..........1......111....1..1...1.1.111111
rrnAC0088       :VVGV::::::::IV:::::::::::::::::::::::S::::Y::V:::H:::T:T:::
Hmu1250         ::::::Y:::::::::VSV::::::::::V::::::SV::::::::::::::F::G:---

consensus       AGQGHAAYLGGGRDDEPAAYDLASPMGQTNTDAPPTLLLHGDADDVLPIEQARRLADALD
#oth            1111.11....111.1.1...1...1..11111....11..11.1.1.11.1111...11
rrnAC0088       ::E::R::::::P::::::::::::V::V::::::::::::SE:::V:PS:SEL:::::G
Hmu1250         --:S::D::::T:E:V:E:::F:::::::DVGT::::VV:::::E:::::::::Y:::V:

consensus       ALSDAAHETIEGGDHGFPFHGAQYDDAFDRTIEETDQFLIRRIGGDRDDGRPDNDGPRDA
#oth            1111111111111.....111111..111..1.1111111111.1111111.11...111
rrnAC0088       PMT:VV:::VP-S:::::::::::::VYE::V:-----F:::::T:----S::T::::G:
Hmu1250         :::T::FVV:::::::::------:::::::::::::::TTQL::Q::::::P::::L:G

consensus       GDLDDGALGDDAAGESDRISDLGSGQPTDGDGSDRRDGPGF
#oth            .1111.11.1111.1111111..1.111.11.11.111111
rrnAC0088       ::-:T:LP:G:LS:PT:::::::::---:VH::::::::::
Hmu1250         :P:E::::::G:::::-----::T::::::::TG:Q-----