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2 genomes BUD3478 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC2355

 - -

Hmu0008

 - - - -

Pairwise sequence scores
Consensus score1280 rrnAC2355 Hmu0008
929rrnAC2355 1249 563
914Hmu0008 563 1259 

171 symbols
consensus       MSRVDERGRRAVSPVIGVVILVAIAAILAATIGVFALQFGDRQQEQAPQVAITADYNERT
#oth            .11.11.11.1....1...1..1.11.....11....1.1111111..1..11.1.1...
rrnAC2355       :::::::-::::::::::::::G:V::::::V:::::G:SEQ:PT:::::::V:::::::
Hmu0008         :TT:GG::D:G::::V:::V:::::V::::::S:::::::::G::P::S::M::Q:D:::

consensus       TGNGQYLRLSFRSGDRIERRNLSLQLRGAKDSGGTDVALDESANPIQAQAGTRIDAGDEI
#oth            .1..1.11.111...111111..1111..11.1..1.11.1111.111..1.1111.111
rrnAC2355       ::::E::N:::S:::TVY:N:::VVVS:::S::::::T::--T:::::::S:::TS:T::
Hmu0008         :P::::F::TV:::::::T:Q::::::::V::T::S::V::::D:LGT::::VL::::TV

consensus       SIGANQFTGIPSSGAHLDLRDAEIRLVWNPADEDREESAIIWRWPDPSRRN
#oth            1.111.1.11..1.1....1..11....1.1111111111.1..11.1111
rrnAC2355       T:HQG:::::::-:D:::::::TL:::::::::PES:TYV:Y::::::Q::
Hmu0008         ::::::V:PT:::::::::S::::::::D:QEP:::G:::::::-E:T:--