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2 genomes BUD3484 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC1837

 - -

Hmu0966

 - - - -

Pairwise sequence scores
Consensus score1209 rrnAC1837 Hmu0966
801rrnAC1837 1020 401
809Hmu0966 401 1018 

152 symbols
consensus       MDIPGEDDPNDSIADEGGTLPEKDEPDPEQIGPGVPTAPGTETDPESLGPDIPDPPDPGA
#oth            111111.1.11.1111.1111111111..11111111111111....1..11.1.111..
rrnAC1837       ::::::::::E:----::V:S::S:YE::EF------------::::::::V:S:S:-::
Hmu0966         ---VSS:E:D:::::::P:P:SV:G::::::::::::::::::::::M::E:::::E:::

consensus       ADADAEGVRLFWKLVIVFNVALLALALGPMLAYFEGDWDRGLRIFAVGAIALGYGLFRYY
#oth            1.1..1111..1...1.....111.11...1...1.11.1.11..1..11.11..11..1
rrnAC1837       Y:G::T:--::V:::::::::::::S::::::::::QV:L:V:::L::V::F:::T:::V
Hmu0966         ::::::S::::::::L:::::VFG::V:::F:::L:::::::Q::::::L::V:::V:::

consensus       QFERDRREDARDEPTETTDTQPDGAEASDHNG
#oth            1.1.1.11.11111111111111111111111
rrnAC1837       ::::E:KS:DE:::::::::::::::::::::
Hmu0966         G:H::::::::---------------------