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2 genomes BUD3488 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC0508

 - -

Hmu1173

 - - - -

Pairwise sequence scores
Consensus score1414 rrnAC0508 Hmu1173
1183rrnAC0508 1424 851
1082Hmu1173 851 1334 

190 symbols
consensus       MSNDLNRRTLIRSTAAIAAAGLLAGCGGDGGDAGEDATDAEEMESAEAAEMESTETEEMD
#oth            .111.1...11.1.1.111.......1.1...11111.11.11.11111..111111111
rrnAC0508       :T:::D:::F::T:::VSG:::::::::S:::G:S:E:E:::::TT::E:::::::::::
Hmu1173         ::DS::::::L:::G:::::::::::S::::::T:S:::D:MT:::TE:::---------

consensus       TESGGGMESAEAPDEVADYLGESSNFDGSMADMTDQDEVSVSVGAEANGGAFAFDPAAIN
#oth            ...1.11111..11.....1..1.....1111..1..1.1.1....1.....11..1.11
rrnAC0508       :::S::::T::::S:::::V::::::::::VV::::::::::::::G:::::::::P:::
Hmu1173         :::::S--:M::S:::::::::T:::::TV::::G::T:T:T::::::::::GY::::VQ

consensus       ISSGTTVEFEWTGQGAGHNVKSEGDGPLDSGGAVAEEGTEYEHTFEESGTFRYNCTPHKA
#oth            1.1....11....1.11..............1..11..11..1...11..11.1.1...1
rrnAC0508       V:T::::VW::::::::::::::::::::::S:::::::T::Y::::T::YL:::V::::
Hmu1173         :::::::::::::E:GT:::::::::::::::::DT::V:::::::S::::::Y:::::S

consensus       LGMKGAIVVE
#oth            ...1..1...
rrnAC0508       :::V::V:::
Hmu1173         ::::::::::