2 genomes BUD3507 2 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0488 - - Hmu1163 - - - -

Pairwise sequence scores
Consensus score	1980	rrnAC0488	Hmu1163
1448	rrnAC0488	1989	1107
1639	Hmu1163	1107	1953

264 symbols
consensus       MMSAGAIIDLDGTVYHGDDLLPGAAAAIDSLRAAGEGICFFSNNPIRNGAAYVDRLADLG
#oth            1111.1.1..........1.1...111..11.1111111......111.11..1..11..
rrnAC0488       :TV:::::::::::::::T::::::S:::VF:ER:L::::::::::HD:SE::E::RG::
Hmu1163         -::R:V:V::::::::::::V:::P:G:::::::S:SLL::::::T::::::::::::::

consensus       VDAREGEACSAADVTAEYLRARHADDAVFLIGADRIAEILDGEEAALTDDPARADVLLAG
#oth            .11.1.....111..1...111..1.1..11.1.111111111111.11..111.....1
rrnAC0488       ::::::::::SGV::R:::NGS::G:D::V::S:PLRSMVT:T::R:VE:::ET:::::S
Hmu1163         :TV:P:::::::::::::::::::::::::V::::::::::T:GV::::::E::::::::

consensus       WSDEFHYDDMVDALRAIDEETTFLGTDPDRTFPGQNGDPTPGSGAIINAVAGVIEADPDR
#oth            .111...1........1..111............11.1.1......1......1.11..1
rrnAC0488       :T:G:::H:::::::::::::V::::::::::::ED:::V:::::::::::::::R::::
Hmu1163         ::P:::::::::::::Y::TV::::::::::::::::L::::::::V::::::L::E::Q

consensus       ILGKPSRRAIQAALDRLDCAASDCLIIGDRLETDIAMGERAGMETALVRSGASNRRDLAR
#oth            ......11.1....1..111111.11.....1..1.....1..1.1..11.111111.11
rrnAC0488       ::::::EI:V::::E:::::PTE:V:::::::::::::::N::T:V:::T:V::E:S:E:
Hmu1163         :::::::::::::::::GVP:::::V:::::S::V:::::::::::::L:::TT:E:::D

consensus       SAVRPDHVIDSIADIDEVLSERDV
#oth            .1.1..1.1..111111..11111
rrnAC0488       :::T::Y::::LG::E:::TSL::
Hmu1163         :D::::::L::::EV:S:::::--