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2 genomes BUD3514 2 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
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rrnAC1845

 - -

Hmu0804

 - - - -

Pairwise sequence scores
Consensus score1177 rrnAC1845 Hmu0804
701rrnAC1845 1071 296
772Hmu0804 296 1139 

161 symbols
consensus       VIYRVVLAVVLATALIAATAGAIDDARADAASAMMERQADEIEAEADMLLETDDALDNGD
#oth            111111111111...11..111111..1111.11111.11.1111111.1....111111
rrnAC1845       -----------M::::G:::P:LST:::::::GT::::L::LG::LT::V:::::TP:::
Hmu0804         :::::::::::::::V:::L:P:::::RQRT:::VSD::S:::RV::T::::::P::GPG

consensus       ARRAVELRLPARTWTNAGVRRLQLRPPTDRAGARLATLLTDGRKRTRQLPGIPIRTPAGG
#oth            ...1.1..1.1..1.11..1.111111.11.11111111111111.1..1.1.1..11.1
rrnAC1845       :::::::::::::Y:::::::::F---:E:::VGV::WTVES::Q:E::V::::::T::T
Hmu0804         :::V:T::V:T::::SG::E:VS::::::Q:P:::SW:::::QP:::::::V:L:::D::

consensus       DRVLRRGGRHRLVLSLDRRDGARVLMVRRLKSEAAARSGHA
#oth            111.111.1.1..11.1111.11.11.1.1.1111111111
rrnAC1845       ::-:EEP:T:Q::FV:T:S::Q::V::H:F:::::::::::
Hmu0804         PV:::::::::::::::G:P::P::T:::::----------